Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC16.33■□□□□ 0.2
Hmx3P42581 Gm45444-201ENSMUST00000211394 898 ntBASIC16.33■□□□□ 0.2
Hmx3P42581 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC16.33■□□□□ 0.2
Hmx3P42581 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmx3P42581 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmx3P42581 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmx3P42581 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmx3P42581 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Hmx3P42581 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmx3P42581 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmx3P42581 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hmx3P42581 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Hmx3P42581 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hmx3P42581 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.32■□□□□ 0.2
Hmx3P42581 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmx3P42581 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmx3P42581 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Hmx3P42581 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hmx3P42581 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hmx3P42581 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmx3P42581 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmx3P42581 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmx3P42581 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hmx3P42581 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmx3P42581 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmx3P42581 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.31■□□□□ 0.2
Hmx3P42581 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC16.31■□□□□ 0.2
Hmx3P42581 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Hmx3P42581 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.31■□□□□ 0.2
Hmx3P42581 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmx3P42581 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmx3P42581 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Hmx3P42581 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmx3P42581 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmx3P42581 Golph3-205ENSMUST00000228671 2842 ntBASIC16.3■□□□□ 0.2
Hmx3P42581 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.3■□□□□ 0.2
Hmx3P42581 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmx3P42581 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmx3P42581 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmx3P42581 Gm13238-201ENSMUST00000117655 780 ntBASIC16.3■□□□□ 0.2
Hmx3P42581 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.3■□□□□ 0.2
Hmx3P42581 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Hmx3P42581 Gm5921-201ENSMUST00000075898 882 ntBASIC16.3■□□□□ 0.2
Hmx3P42581 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmx3P42581 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.3■□□□□ 0.2
Hmx3P42581 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.3■□□□□ 0.2
Hmx3P42581 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Hmx3P42581 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmx3P42581 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmx3P42581 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmx3P42581 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hmx3P42581 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.29■□□□□ 0.2
Hmx3P42581 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Hmx3P42581 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmx3P42581 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmx3P42581 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Hmx3P42581 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmx3P42581 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmx3P42581 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmx3P42581 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmx3P42581 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmx3P42581 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Hmx3P42581 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmx3P42581 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmx3P42581 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hmx3P42581 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmx3P42581 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmx3P42581 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.28■□□□□ 0.2
Hmx3P42581 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hmx3P42581 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC16.28■□□□□ 0.2
Hmx3P42581 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16.28■□□□□ 0.2
Hmx3P42581 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmx3P42581 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmx3P42581 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmx3P42581 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmx3P42581 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmx3P42581 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmx3P42581 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmx3P42581 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmx3P42581 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Hmx3P42581 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmx3P42581 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hmx3P42581 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hmx3P42581 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Hmx3P42581 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hmx3P42581 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Hmx3P42581 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hmx3P42581 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hmx3P42581 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Hmx3P42581 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Hmx3P42581 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Hmx3P42581 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.27■□□□□ 0.19
Hmx3P42581 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmx3P42581 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmx3P42581 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmx3P42581 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Hmx3P42581 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Hmx3P42581 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmx3P42581 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmx3P42581 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms