Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Fen1P39749 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Fen1P39749 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Fen1P39749 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Fen1P39749 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Fen1P39749 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Fen1P39749 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Fen1P39749 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Fen1P39749 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.73■□□□□ 0.75
Fen1P39749 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.73■□□□□ 0.75
Fen1P39749 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Fen1P39749 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Fen1P39749 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Fen1P39749 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Fen1P39749 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Fen1P39749 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Fen1P39749 Gm15546-201ENSMUST00000122095 826 ntBASIC19.72■□□□□ 0.75
Fen1P39749 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Fen1P39749 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.72■□□□□ 0.75
Fen1P39749 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Fen1P39749 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Fen1P39749 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.72■□□□□ 0.75
Fen1P39749 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Fen1P39749 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Fen1P39749 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Fen1P39749 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Fen1P39749 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Fen1P39749 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Fen1P39749 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Fen1P39749 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Fen1P39749 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.71■□□□□ 0.75
Fen1P39749 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.71■□□□□ 0.75
Fen1P39749 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Fen1P39749 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Fen1P39749 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Fen1P39749 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Fen1P39749 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Fen1P39749 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Fen1P39749 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.71■□□□□ 0.75
Fen1P39749 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Fen1P39749 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.71■□□□□ 0.75
Fen1P39749 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Fen1P39749 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Fen1P39749 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.71■□□□□ 0.75
Fen1P39749 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Fen1P39749 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.7■□□□□ 0.74
Fen1P39749 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.7■□□□□ 0.74
Fen1P39749 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Fen1P39749 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.7■□□□□ 0.74
Fen1P39749 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Fen1P39749 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Fen1P39749 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Fen1P39749 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Fen1P39749 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Fen1P39749 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Fen1P39749 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.69■□□□□ 0.74
Fen1P39749 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Fen1P39749 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Fen1P39749 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Fen1P39749 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.69■□□□□ 0.74
Fen1P39749 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Fen1P39749 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Fen1P39749 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Fen1P39749 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.68■□□□□ 0.74
Fen1P39749 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Fen1P39749 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Fen1P39749 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Fen1P39749 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Fen1P39749 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Fen1P39749 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Fen1P39749 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Fen1P39749 Gm45444-201ENSMUST00000211394 898 ntBASIC19.68■□□□□ 0.74
Fen1P39749 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Fen1P39749 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Fen1P39749 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Fen1P39749 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Fen1P39749 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Fen1P39749 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Fen1P39749 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
Fen1P39749 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.67■□□□□ 0.74
Fen1P39749 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.67■□□□□ 0.74
Fen1P39749 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Fen1P39749 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Fen1P39749 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Fen1P39749 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Fen1P39749 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Fen1P39749 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.66■□□□□ 0.74
Fen1P39749 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Fen1P39749 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Fen1P39749 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Fen1P39749 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.66■□□□□ 0.74
Fen1P39749 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Fen1P39749 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Fen1P39749 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Fen1P39749 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Fen1P39749 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Fen1P39749 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.65■□□□□ 0.74
Fen1P39749 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Fen1P39749 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Fen1P39749 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms