Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
NclP09405 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
NclP09405 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC29.3■■■□□ 2.28
NclP09405 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC29.3■■■□□ 2.28
NclP09405 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
NclP09405 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC29.29■■■□□ 2.28
NclP09405 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
NclP09405 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
NclP09405 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
NclP09405 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
NclP09405 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
NclP09405 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
NclP09405 Gm10849-201ENSMUST00000100397 618 ntBASIC29.28■■■□□ 2.28
NclP09405 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
NclP09405 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC29.28■■■□□ 2.28
NclP09405 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
NclP09405 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
NclP09405 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
NclP09405 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
NclP09405 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
NclP09405 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC29.27■■■□□ 2.28
NclP09405 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC29.27■■■□□ 2.28
NclP09405 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC29.27■■■□□ 2.28
NclP09405 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
NclP09405 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
NclP09405 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.28
NclP09405 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.28
NclP09405 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC29.26■■■□□ 2.28
NclP09405 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
NclP09405 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
NclP09405 Gm27405-201ENSMUST00000184201 112 ntBASIC29.26■■■□□ 2.27
NclP09405 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
NclP09405 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC29.26■■■□□ 2.27
NclP09405 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
NclP09405 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
NclP09405 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
NclP09405 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
NclP09405 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
NclP09405 Gm18671-201ENSMUST00000214826 683 ntBASIC29.25■■■□□ 2.27
NclP09405 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC29.25■■■□□ 2.27
NclP09405 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
NclP09405 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
NclP09405 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC29.24■■■□□ 2.27
NclP09405 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
NclP09405 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC29.24■■■□□ 2.27
NclP09405 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
NclP09405 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC29.24■■■□□ 2.27
NclP09405 Gm42778-201ENSMUST00000199644 553 ntBASIC29.24■■■□□ 2.27
NclP09405 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
NclP09405 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
NclP09405 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC29.24■■■□□ 2.27
NclP09405 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
NclP09405 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
NclP09405 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
NclP09405 Gm10571-201ENSMUST00000097869 1638 ntBASIC29.23■■■□□ 2.27
NclP09405 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC29.23■■■□□ 2.27
NclP09405 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC29.23■■■□□ 2.27
NclP09405 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC29.23■■■□□ 2.27
NclP09405 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC29.23■■■□□ 2.27
NclP09405 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC29.22■■■□□ 2.27
NclP09405 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC29.22■■■□□ 2.27
NclP09405 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
NclP09405 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
NclP09405 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
NclP09405 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
NclP09405 Gm10033-202ENSMUST00000211874 928 ntBASIC29.21■■■□□ 2.27
NclP09405 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
NclP09405 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
NclP09405 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
NclP09405 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.27
NclP09405 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
NclP09405 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC29.2■■■□□ 2.27
NclP09405 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
NclP09405 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
NclP09405 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
NclP09405 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
NclP09405 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC29.19■■■□□ 2.26
NclP09405 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
NclP09405 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC29.19■■■□□ 2.26
NclP09405 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
NclP09405 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC29.19■■■□□ 2.26
NclP09405 Gm14281-201ENSMUST00000121700 1294 ntBASIC29.19■■■□□ 2.26
NclP09405 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
NclP09405 Gm27801-201ENSMUST00000184174 223 ntBASIC29.19■■■□□ 2.26
NclP09405 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC29.19■■■□□ 2.26
NclP09405 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC29.19■■■□□ 2.26
NclP09405 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC29.19■■■□□ 2.26
NclP09405 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC29.19■■■□□ 2.26
NclP09405 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC29.19■■■□□ 2.26
NclP09405 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
NclP09405 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
NclP09405 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC29.18■■■□□ 2.26
NclP09405 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC29.18■■■□□ 2.26
NclP09405 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
NclP09405 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
NclP09405 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC29.18■■■□□ 2.26
NclP09405 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC29.18■■■□□ 2.26
NclP09405 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC29.18■■■□□ 2.26
NclP09405 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
NclP09405 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms