Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTSDP07339 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTSDP07339 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTSDP07339 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTSDP07339 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CTSDP07339 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CTSDP07339 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTSDP07339 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.38■□□□□ 0.53
CTSDP07339 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CTSDP07339 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CTSDP07339 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTSDP07339 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTSDP07339 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTSDP07339 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTSDP07339 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CTSDP07339 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTSDP07339 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
CTSDP07339 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.37■□□□□ 0.53
CTSDP07339 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.36■□□□□ 0.53
CTSDP07339 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.36■□□□□ 0.53
CTSDP07339 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTSDP07339 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTSDP07339 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CTSDP07339 RARRES2P2-201ENST00000394842 485 ntBASIC18.36■□□□□ 0.53
CTSDP07339 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.36■□□□□ 0.53
CTSDP07339 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTSDP07339 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTSDP07339 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTSDP07339 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CTSDP07339 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTSDP07339 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTSDP07339 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.35■□□□□ 0.53
CTSDP07339 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTSDP07339 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTSDP07339 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.35■□□□□ 0.53
CTSDP07339 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.35■□□□□ 0.53
CTSDP07339 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTSDP07339 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTSDP07339 AC022616.5-201ENST00000518796 181 ntBASIC18.35■□□□□ 0.53
CTSDP07339 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CTSDP07339 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTSDP07339 AC026310.3-201ENST00000625186 2373 ntBASIC18.35■□□□□ 0.53
CTSDP07339 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.35■□□□□ 0.53
CTSDP07339 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTSDP07339 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.35■□□□□ 0.53
CTSDP07339 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
CTSDP07339 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTSDP07339 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CTSDP07339 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTSDP07339 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTSDP07339 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTSDP07339 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTSDP07339 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.34■□□□□ 0.53
CTSDP07339 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTSDP07339 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTSDP07339 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.34■□□□□ 0.53
CTSDP07339 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.33■□□□□ 0.53
CTSDP07339 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
CTSDP07339 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.33■□□□□ 0.53
CTSDP07339 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTSDP07339 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTSDP07339 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTSDP07339 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTSDP07339 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CTSDP07339 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.33■□□□□ 0.52
CTSDP07339 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.33■□□□□ 0.52
CTSDP07339 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.32■□□□□ 0.52
CTSDP07339 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.32■□□□□ 0.52
CTSDP07339 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CTSDP07339 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
CTSDP07339 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTSDP07339 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTSDP07339 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTSDP07339 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.32■□□□□ 0.52
CTSDP07339 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC18.31■□□□□ 0.52
CTSDP07339 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.31■□□□□ 0.52
CTSDP07339 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CTSDP07339 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CTSDP07339 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CTSDP07339 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTSDP07339 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.31■□□□□ 0.52
CTSDP07339 AC004448.1-201ENST00000458332 883 ntBASIC18.31■□□□□ 0.52
CTSDP07339 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTSDP07339 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CTSDP07339 AC144652.1-201ENST00000609974 1624 ntBASIC18.31■□□□□ 0.52
CTSDP07339 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CTSDP07339 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTSDP07339 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CTSDP07339 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTSDP07339 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.3■□□□□ 0.52
CTSDP07339 FAM99A-202ENST00000538190 1989 ntBASIC18.3■□□□□ 0.52
CTSDP07339 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CTSDP07339 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.3■□□□□ 0.52
CTSDP07339 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTSDP07339 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.3■□□□□ 0.52
CTSDP07339 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTSDP07339 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTSDP07339 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.3■□□□□ 0.52
CTSDP07339 AC010542.4-201ENST00000563151 1910 ntBASIC18.29■□□□□ 0.52
CTSDP07339 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms