Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CfdP03953 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CfdP03953 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CfdP03953 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CfdP03953 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CfdP03953 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CfdP03953 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CfdP03953 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CfdP03953 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CfdP03953 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CfdP03953 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CfdP03953 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CfdP03953 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CfdP03953 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CfdP03953 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CfdP03953 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CfdP03953 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CfdP03953 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.48■□□□□ 0.23
CfdP03953 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CfdP03953 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CfdP03953 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CfdP03953 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CfdP03953 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CfdP03953 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CfdP03953 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.48■□□□□ 0.23
CfdP03953 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CfdP03953 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CfdP03953 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CfdP03953 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CfdP03953 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC16.47■□□□□ 0.23
CfdP03953 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC16.47■□□□□ 0.23
CfdP03953 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CfdP03953 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC16.47■□□□□ 0.23
CfdP03953 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CfdP03953 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CfdP03953 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CfdP03953 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CfdP03953 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CfdP03953 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CfdP03953 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CfdP03953 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.46■□□□□ 0.23
CfdP03953 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.46■□□□□ 0.23
CfdP03953 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CfdP03953 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
CfdP03953 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CfdP03953 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CfdP03953 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CfdP03953 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CfdP03953 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CfdP03953 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CfdP03953 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CfdP03953 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
CfdP03953 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CfdP03953 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CfdP03953 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CfdP03953 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CfdP03953 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CfdP03953 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CfdP03953 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CfdP03953 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC16.45■□□□□ 0.22
CfdP03953 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CfdP03953 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CfdP03953 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.45■□□□□ 0.22
CfdP03953 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CfdP03953 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
CfdP03953 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CfdP03953 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CfdP03953 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CfdP03953 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CfdP03953 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CfdP03953 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CfdP03953 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CfdP03953 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CfdP03953 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CfdP03953 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CfdP03953 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CfdP03953 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CfdP03953 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CfdP03953 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC16.43■□□□□ 0.22
CfdP03953 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CfdP03953 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CfdP03953 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.43■□□□□ 0.22
CfdP03953 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CfdP03953 Rarb-207ENSMUST00000225921 2756 ntBASIC16.43■□□□□ 0.22
CfdP03953 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
CfdP03953 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CfdP03953 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CfdP03953 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CfdP03953 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CfdP03953 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.42■□□□□ 0.22
CfdP03953 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CfdP03953 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CfdP03953 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC16.42■□□□□ 0.22
CfdP03953 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CfdP03953 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CfdP03953 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.42■□□□□ 0.22
CfdP03953 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.41■□□□□ 0.22
CfdP03953 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CfdP03953 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CfdP03953 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms