Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.14■□□□□ 0.49
Hps1O08983 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hps1O08983 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hps1O08983 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hps1O08983 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hps1O08983 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hps1O08983 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.14■□□□□ 0.49
Hps1O08983 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hps1O08983 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Hps1O08983 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hps1O08983 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Hps1O08983 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Hps1O08983 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Hps1O08983 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hps1O08983 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Hps1O08983 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hps1O08983 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hps1O08983 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hps1O08983 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hps1O08983 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hps1O08983 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hps1O08983 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.13■□□□□ 0.49
Hps1O08983 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.13■□□□□ 0.49
Hps1O08983 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.13■□□□□ 0.49
Hps1O08983 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hps1O08983 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hps1O08983 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hps1O08983 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hps1O08983 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hps1O08983 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Hps1O08983 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hps1O08983 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hps1O08983 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hps1O08983 Gm12922-201ENSMUST00000120626 809 ntBASIC18.12■□□□□ 0.49
Hps1O08983 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hps1O08983 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hps1O08983 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hps1O08983 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hps1O08983 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hps1O08983 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.12■□□□□ 0.49
Hps1O08983 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Hps1O08983 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hps1O08983 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hps1O08983 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hps1O08983 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Hps1O08983 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Hps1O08983 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Hps1O08983 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Hps1O08983 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.11■□□□□ 0.49
Hps1O08983 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.11■□□□□ 0.49
Hps1O08983 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hps1O08983 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hps1O08983 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hps1O08983 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Hps1O08983 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hps1O08983 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hps1O08983 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.11■□□□□ 0.49
Hps1O08983 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Hps1O08983 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hps1O08983 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hps1O08983 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hps1O08983 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.1■□□□□ 0.49
Hps1O08983 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Hps1O08983 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Hps1O08983 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.1■□□□□ 0.49
Hps1O08983 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.1■□□□□ 0.49
Hps1O08983 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hps1O08983 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hps1O08983 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hps1O08983 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hps1O08983 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hps1O08983 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hps1O08983 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hps1O08983 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hps1O08983 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.09■□□□□ 0.49
Hps1O08983 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.09■□□□□ 0.49
Hps1O08983 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hps1O08983 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hps1O08983 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hps1O08983 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hps1O08983 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hps1O08983 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Hps1O08983 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Hps1O08983 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hps1O08983 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hps1O08983 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hps1O08983 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hps1O08983 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hps1O08983 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Hps1O08983 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hps1O08983 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Hps1O08983 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Hps1O08983 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hps1O08983 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.07■□□□□ 0.48
Hps1O08983 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Hps1O08983 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hps1O08983 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hps1O08983 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Hps1O08983 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.07■□□□□ 0.48
Hps1O08983 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms