Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shisa8J3QNX5 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Shisa8J3QNX5 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shisa8J3QNX5 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Shisa8J3QNX5 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shisa8J3QNX5 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Shisa8J3QNX5 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shisa8J3QNX5 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shisa8J3QNX5 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shisa8J3QNX5 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shisa8J3QNX5 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Shisa8J3QNX5 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Shisa8J3QNX5 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shisa8J3QNX5 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.95■□□□□ 0.46
Shisa8J3QNX5 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shisa8J3QNX5 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shisa8J3QNX5 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.95■□□□□ 0.46
Shisa8J3QNX5 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Shisa8J3QNX5 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shisa8J3QNX5 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shisa8J3QNX5 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.95■□□□□ 0.46
Shisa8J3QNX5 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Shisa8J3QNX5 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shisa8J3QNX5 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shisa8J3QNX5 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shisa8J3QNX5 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Shisa8J3QNX5 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shisa8J3QNX5 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Shisa8J3QNX5 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Shisa8J3QNX5 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Shisa8J3QNX5 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shisa8J3QNX5 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Shisa8J3QNX5 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shisa8J3QNX5 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Shisa8J3QNX5 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shisa8J3QNX5 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.94■□□□□ 0.46
Shisa8J3QNX5 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Shisa8J3QNX5 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Shisa8J3QNX5 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shisa8J3QNX5 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shisa8J3QNX5 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shisa8J3QNX5 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.93■□□□□ 0.46
Shisa8J3QNX5 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shisa8J3QNX5 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Shisa8J3QNX5 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shisa8J3QNX5 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shisa8J3QNX5 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shisa8J3QNX5 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shisa8J3QNX5 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shisa8J3QNX5 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shisa8J3QNX5 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Shisa8J3QNX5 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Shisa8J3QNX5 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shisa8J3QNX5 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shisa8J3QNX5 Mir6538-201ENSMUST00000183713 110 ntBASIC17.92■□□□□ 0.46
Shisa8J3QNX5 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.92■□□□□ 0.46
Shisa8J3QNX5 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shisa8J3QNX5 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Shisa8J3QNX5 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.91■□□□□ 0.46
Shisa8J3QNX5 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shisa8J3QNX5 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shisa8J3QNX5 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shisa8J3QNX5 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shisa8J3QNX5 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.91■□□□□ 0.46
Shisa8J3QNX5 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.91■□□□□ 0.46
Shisa8J3QNX5 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.91■□□□□ 0.46
Shisa8J3QNX5 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shisa8J3QNX5 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shisa8J3QNX5 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shisa8J3QNX5 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shisa8J3QNX5 Gm13238-201ENSMUST00000117655 780 ntBASIC17.9■□□□□ 0.46
Shisa8J3QNX5 Gm45444-201ENSMUST00000211394 898 ntBASIC17.9■□□□□ 0.46
Shisa8J3QNX5 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shisa8J3QNX5 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Shisa8J3QNX5 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shisa8J3QNX5 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shisa8J3QNX5 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shisa8J3QNX5 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shisa8J3QNX5 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Shisa8J3QNX5 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Shisa8J3QNX5 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shisa8J3QNX5 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Shisa8J3QNX5 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shisa8J3QNX5 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Shisa8J3QNX5 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Shisa8J3QNX5 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Shisa8J3QNX5 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.89■□□□□ 0.45
Shisa8J3QNX5 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shisa8J3QNX5 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shisa8J3QNX5 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shisa8J3QNX5 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shisa8J3QNX5 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Shisa8J3QNX5 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shisa8J3QNX5 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shisa8J3QNX5 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.88■□□□□ 0.45
Shisa8J3QNX5 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.88■□□□□ 0.45
Shisa8J3QNX5 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shisa8J3QNX5 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Shisa8J3QNX5 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shisa8J3QNX5 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms