Protein–RNA interactions for Protein: A2ACT7

Col9a3, Collagen, type IX, alpha 3, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a3A2ACT7 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.4■□□□□ 0.7
Col9a3A2ACT7 Gm12441-201ENSMUST00000121806 588 ntBASIC19.4■□□□□ 0.7
Col9a3A2ACT7 Gm10653-202ENSMUST00000139570 835 ntBASIC19.4■□□□□ 0.7
Col9a3A2ACT7 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.4■□□□□ 0.7
Col9a3A2ACT7 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.4■□□□□ 0.7
Col9a3A2ACT7 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Col9a3A2ACT7 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col9a3A2ACT7 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col9a3A2ACT7 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col9a3A2ACT7 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Col9a3A2ACT7 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Col9a3A2ACT7 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Col9a3A2ACT7 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col9a3A2ACT7 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Col9a3A2ACT7 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Col9a3A2ACT7 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.39■□□□□ 0.69
Col9a3A2ACT7 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col9a3A2ACT7 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.39■□□□□ 0.69
Col9a3A2ACT7 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col9a3A2ACT7 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.38■□□□□ 0.69
Col9a3A2ACT7 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Col9a3A2ACT7 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Col9a3A2ACT7 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Col9a3A2ACT7 Mir5133-201ENSMUST00000174955 77 ntBASIC19.38■□□□□ 0.69
Col9a3A2ACT7 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Col9a3A2ACT7 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.38■□□□□ 0.69
Col9a3A2ACT7 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.38■□□□□ 0.69
Col9a3A2ACT7 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Col9a3A2ACT7 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col9a3A2ACT7 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col9a3A2ACT7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.37■□□□□ 0.69
Col9a3A2ACT7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Col9a3A2ACT7 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col9a3A2ACT7 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col9a3A2ACT7 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col9a3A2ACT7 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col9a3A2ACT7 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col9a3A2ACT7 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col9a3A2ACT7 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.36■□□□□ 0.69
Col9a3A2ACT7 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col9a3A2ACT7 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.36■□□□□ 0.69
Col9a3A2ACT7 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Col9a3A2ACT7 Nespas-201ENSMUST00000143738 1083 ntBASIC19.36■□□□□ 0.69
Col9a3A2ACT7 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Col9a3A2ACT7 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col9a3A2ACT7 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.36■□□□□ 0.69
Col9a3A2ACT7 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Col9a3A2ACT7 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Col9a3A2ACT7 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Col9a3A2ACT7 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col9a3A2ACT7 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Col9a3A2ACT7 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col9a3A2ACT7 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Col9a3A2ACT7 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Col9a3A2ACT7 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.35■□□□□ 0.69
Col9a3A2ACT7 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col9a3A2ACT7 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.35■□□□□ 0.69
Col9a3A2ACT7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col9a3A2ACT7 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col9a3A2ACT7 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Col9a3A2ACT7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col9a3A2ACT7 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
Col9a3A2ACT7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
Col9a3A2ACT7 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.34■□□□□ 0.69
Col9a3A2ACT7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Col9a3A2ACT7 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col9a3A2ACT7 Gm4968-201ENSMUST00000071458 858 ntBASIC19.34■□□□□ 0.69
Col9a3A2ACT7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Col9a3A2ACT7 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.34■□□□□ 0.69
Col9a3A2ACT7 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Col9a3A2ACT7 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.34■□□□□ 0.69
Col9a3A2ACT7 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col9a3A2ACT7 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col9a3A2ACT7 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col9a3A2ACT7 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.33■□□□□ 0.68
Col9a3A2ACT7 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col9a3A2ACT7 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col9a3A2ACT7 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col9a3A2ACT7 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Col9a3A2ACT7 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col9a3A2ACT7 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Col9a3A2ACT7 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Col9a3A2ACT7 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col9a3A2ACT7 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.32■□□□□ 0.68
Col9a3A2ACT7 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Col9a3A2ACT7 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col9a3A2ACT7 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col9a3A2ACT7 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Col9a3A2ACT7 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Col9a3A2ACT7 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col9a3A2ACT7 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col9a3A2ACT7 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
Col9a3A2ACT7 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.31■□□□□ 0.68
Col9a3A2ACT7 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Col9a3A2ACT7 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.31■□□□□ 0.68
Col9a3A2ACT7 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col9a3A2ACT7 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Col9a3A2ACT7 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Col9a3A2ACT7 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col9a3A2ACT7 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms