Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Etf1-202ENSMUST00000180351 108 ntBASIC17.31■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.31■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.31■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm15546-201ENSMUST00000122095 826 ntBASIC17.3■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.28■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.27■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.27■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.26■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.26■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.25■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.25■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.25■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.24■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.24■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.23■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm22238-201ENSMUST00000175222 88 ntBASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 176.7 ms