Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav17A0A075B655 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav17A0A075B655 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav17A0A075B655 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav17A0A075B655 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trav17A0A075B655 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav17A0A075B655 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav17A0A075B655 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav17A0A075B655 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav17A0A075B655 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trav17A0A075B655 Gm45444-201ENSMUST00000211394 898 ntBASIC15.66■□□□□ 0.1
Trav17A0A075B655 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC15.66■□□□□ 0.1
Trav17A0A075B655 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav17A0A075B655 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.66■□□□□ 0.1
Trav17A0A075B655 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav17A0A075B655 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav17A0A075B655 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Trav17A0A075B655 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav17A0A075B655 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav17A0A075B655 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC15.65■□□□□ 0.1
Trav17A0A075B655 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav17A0A075B655 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav17A0A075B655 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav17A0A075B655 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav17A0A075B655 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav17A0A075B655 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav17A0A075B655 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trav17A0A075B655 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trav17A0A075B655 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav17A0A075B655 Gm6802-201ENSMUST00000167843 1983 ntBASIC15.64■□□□□ 0.09
Trav17A0A075B655 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav17A0A075B655 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC15.64■□□□□ 0.09
Trav17A0A075B655 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav17A0A075B655 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC15.64■□□□□ 0.09
Trav17A0A075B655 Gm10399-202ENSMUST00000202768 748 ntBASIC15.64■□□□□ 0.09
Trav17A0A075B655 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav17A0A075B655 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav17A0A075B655 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav17A0A075B655 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Trav17A0A075B655 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav17A0A075B655 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav17A0A075B655 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav17A0A075B655 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav17A0A075B655 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
Trav17A0A075B655 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav17A0A075B655 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trav17A0A075B655 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav17A0A075B655 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav17A0A075B655 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav17A0A075B655 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav17A0A075B655 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav17A0A075B655 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav17A0A075B655 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav17A0A075B655 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav17A0A075B655 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC15.63■□□□□ 0.09
Trav17A0A075B655 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav17A0A075B655 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trav17A0A075B655 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav17A0A075B655 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav17A0A075B655 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav17A0A075B655 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav17A0A075B655 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav17A0A075B655 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav17A0A075B655 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav17A0A075B655 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav17A0A075B655 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trav17A0A075B655 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav17A0A075B655 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.62■□□□□ 0.09
Trav17A0A075B655 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Trav17A0A075B655 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC15.62■□□□□ 0.09
Trav17A0A075B655 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC15.62■□□□□ 0.09
Trav17A0A075B655 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav17A0A075B655 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav17A0A075B655 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav17A0A075B655 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav17A0A075B655 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav17A0A075B655 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Trav17A0A075B655 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav17A0A075B655 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC15.61■□□□□ 0.09
Trav17A0A075B655 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trav17A0A075B655 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav17A0A075B655 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav17A0A075B655 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav17A0A075B655 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav17A0A075B655 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trav17A0A075B655 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC15.61■□□□□ 0.09
Trav17A0A075B655 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav17A0A075B655 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav17A0A075B655 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav17A0A075B655 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav17A0A075B655 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav17A0A075B655 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trav17A0A075B655 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav17A0A075B655 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trav17A0A075B655 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav17A0A075B655 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trav17A0A075B655 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav17A0A075B655 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav17A0A075B655 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav17A0A075B655 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms