Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9n-4A0A075B631 AC166356.1-201ENSMUST00000228236 1426 ntBASIC13.48□□□□□ -0.25
Trav9n-4A0A075B631 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9n-4A0A075B631 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav9n-4A0A075B631 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9n-4A0A075B631 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9n-4A0A075B631 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9n-4A0A075B631 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9n-4A0A075B631 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9n-4A0A075B631 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav9n-4A0A075B631 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav9n-4A0A075B631 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9n-4A0A075B631 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9n-4A0A075B631 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9n-4A0A075B631 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav9n-4A0A075B631 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9n-4A0A075B631 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9n-4A0A075B631 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9n-4A0A075B631 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9n-4A0A075B631 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav9n-4A0A075B631 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9n-4A0A075B631 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9n-4A0A075B631 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9n-4A0A075B631 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9n-4A0A075B631 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Trav9n-4A0A075B631 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9n-4A0A075B631 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9n-4A0A075B631 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9n-4A0A075B631 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9n-4A0A075B631 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9n-4A0A075B631 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9n-4A0A075B631 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9n-4A0A075B631 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9n-4A0A075B631 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9n-4A0A075B631 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9n-4A0A075B631 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC13.46□□□□□ -0.25
Trav9n-4A0A075B631 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC13.46□□□□□ -0.25
Trav9n-4A0A075B631 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Trav9n-4A0A075B631 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9n-4A0A075B631 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9n-4A0A075B631 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC13.46□□□□□ -0.26
Trav9n-4A0A075B631 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trav9n-4A0A075B631 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9n-4A0A075B631 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9n-4A0A075B631 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trav9n-4A0A075B631 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9n-4A0A075B631 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9n-4A0A075B631 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9n-4A0A075B631 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9n-4A0A075B631 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav9n-4A0A075B631 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9n-4A0A075B631 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC13.45□□□□□ -0.26
Trav9n-4A0A075B631 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trav9n-4A0A075B631 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9n-4A0A075B631 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9n-4A0A075B631 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9n-4A0A075B631 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9n-4A0A075B631 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9n-4A0A075B631 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trav9n-4A0A075B631 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9n-4A0A075B631 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9n-4A0A075B631 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav9n-4A0A075B631 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9n-4A0A075B631 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9n-4A0A075B631 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9n-4A0A075B631 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Trav9n-4A0A075B631 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9n-4A0A075B631 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav9n-4A0A075B631 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav9n-4A0A075B631 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9n-4A0A075B631 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9n-4A0A075B631 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9n-4A0A075B631 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9n-4A0A075B631 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav9n-4A0A075B631 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9n-4A0A075B631 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9n-4A0A075B631 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9n-4A0A075B631 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9n-4A0A075B631 Golph3-202ENSMUST00000226517 2359 ntBASIC13.43□□□□□ -0.26
Trav9n-4A0A075B631 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav9n-4A0A075B631 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9n-4A0A075B631 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav9n-4A0A075B631 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC13.43□□□□□ -0.26
Trav9n-4A0A075B631 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9n-4A0A075B631 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9n-4A0A075B631 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9n-4A0A075B631 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9n-4A0A075B631 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9n-4A0A075B631 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav9n-4A0A075B631 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9n-4A0A075B631 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9n-4A0A075B631 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9n-4A0A075B631 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9n-4A0A075B631 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9n-4A0A075B631 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9n-4A0A075B631 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9n-4A0A075B631 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9n-4A0A075B631 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trav9n-4A0A075B631 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9n-4A0A075B631 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms