Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
H2afb1S4R1E0 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
H2afb1S4R1E0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
H2afb1S4R1E0 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
H2afb1S4R1E0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
H2afb1S4R1E0 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
H2afb1S4R1E0 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
H2afb1S4R1E0 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.89■□□□□ 0.45
H2afb1S4R1E0 Gm7143-201ENSMUST00000222811 859 ntBASIC17.89■□□□□ 0.45
H2afb1S4R1E0 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
H2afb1S4R1E0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
H2afb1S4R1E0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
H2afb1S4R1E0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
H2afb1S4R1E0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
H2afb1S4R1E0 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
H2afb1S4R1E0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.88■□□□□ 0.45
H2afb1S4R1E0 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
H2afb1S4R1E0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.88■□□□□ 0.45
H2afb1S4R1E0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
H2afb1S4R1E0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
H2afb1S4R1E0 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.88■□□□□ 0.45
H2afb1S4R1E0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
H2afb1S4R1E0 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
H2afb1S4R1E0 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
H2afb1S4R1E0 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
H2afb1S4R1E0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
H2afb1S4R1E0 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
H2afb1S4R1E0 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
H2afb1S4R1E0 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.87■□□□□ 0.45
H2afb1S4R1E0 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.87■□□□□ 0.45
H2afb1S4R1E0 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
H2afb1S4R1E0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
H2afb1S4R1E0 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
H2afb1S4R1E0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.86■□□□□ 0.45
H2afb1S4R1E0 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
H2afb1S4R1E0 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
H2afb1S4R1E0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
H2afb1S4R1E0 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
H2afb1S4R1E0 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
H2afb1S4R1E0 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
H2afb1S4R1E0 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.85■□□□□ 0.45
H2afb1S4R1E0 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.84■□□□□ 0.45
H2afb1S4R1E0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.84■□□□□ 0.45
H2afb1S4R1E0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
H2afb1S4R1E0 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
H2afb1S4R1E0 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
H2afb1S4R1E0 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.84■□□□□ 0.45
H2afb1S4R1E0 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
H2afb1S4R1E0 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
H2afb1S4R1E0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
H2afb1S4R1E0 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
H2afb1S4R1E0 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
H2afb1S4R1E0 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
H2afb1S4R1E0 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
H2afb1S4R1E0 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
H2afb1S4R1E0 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
H2afb1S4R1E0 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
H2afb1S4R1E0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
H2afb1S4R1E0 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
H2afb1S4R1E0 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
H2afb1S4R1E0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
H2afb1S4R1E0 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
H2afb1S4R1E0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
H2afb1S4R1E0 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.83■□□□□ 0.44
H2afb1S4R1E0 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
H2afb1S4R1E0 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
H2afb1S4R1E0 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
H2afb1S4R1E0 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.83■□□□□ 0.44
H2afb1S4R1E0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
H2afb1S4R1E0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
H2afb1S4R1E0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
H2afb1S4R1E0 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
H2afb1S4R1E0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
H2afb1S4R1E0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
H2afb1S4R1E0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
H2afb1S4R1E0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
H2afb1S4R1E0 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
H2afb1S4R1E0 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
H2afb1S4R1E0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.81■□□□□ 0.44
H2afb1S4R1E0 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
H2afb1S4R1E0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
H2afb1S4R1E0 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
H2afb1S4R1E0 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
H2afb1S4R1E0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
H2afb1S4R1E0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.81■□□□□ 0.44
H2afb1S4R1E0 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.81■□□□□ 0.44
H2afb1S4R1E0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.81■□□□□ 0.44
H2afb1S4R1E0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
H2afb1S4R1E0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
H2afb1S4R1E0 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
H2afb1S4R1E0 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.8■□□□□ 0.44
H2afb1S4R1E0 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
H2afb1S4R1E0 Gm15820-201ENSMUST00000201566 728 ntBASIC17.8■□□□□ 0.44
H2afb1S4R1E0 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
H2afb1S4R1E0 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
H2afb1S4R1E0 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
H2afb1S4R1E0 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
H2afb1S4R1E0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
H2afb1S4R1E0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
H2afb1S4R1E0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms