Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.82■□□□□ 0.92
CLDN16Q9Y5I7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.82■□□□□ 0.92
CLDN16Q9Y5I7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN16Q9Y5I7 AC133561.4-201ENST00000566112 224 ntBASIC20.82■□□□□ 0.92
CLDN16Q9Y5I7 MIR4767-201ENST00000582827 78 ntBASIC20.82■□□□□ 0.92
CLDN16Q9Y5I7 AC133637.1-201ENST00000624115 1537 ntBASIC20.82■□□□□ 0.92
CLDN16Q9Y5I7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN16Q9Y5I7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN16Q9Y5I7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN16Q9Y5I7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN16Q9Y5I7 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN16Q9Y5I7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN16Q9Y5I7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.81■□□□□ 0.92
CLDN16Q9Y5I7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.81■□□□□ 0.92
CLDN16Q9Y5I7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.81■□□□□ 0.92
CLDN16Q9Y5I7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.81■□□□□ 0.92
CLDN16Q9Y5I7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.81■□□□□ 0.92
CLDN16Q9Y5I7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.81■□□□□ 0.92
CLDN16Q9Y5I7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN16Q9Y5I7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN16Q9Y5I7 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.8■□□□□ 0.92
CLDN16Q9Y5I7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN16Q9Y5I7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CLDN16Q9Y5I7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.8■□□□□ 0.92
CLDN16Q9Y5I7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN16Q9Y5I7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.8■□□□□ 0.92
CLDN16Q9Y5I7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN16Q9Y5I7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN16Q9Y5I7 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.79■□□□□ 0.92
CLDN16Q9Y5I7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
CLDN16Q9Y5I7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN16Q9Y5I7 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.79■□□□□ 0.92
CLDN16Q9Y5I7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN16Q9Y5I7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN16Q9Y5I7 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN16Q9Y5I7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN16Q9Y5I7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.78■□□□□ 0.92
CLDN16Q9Y5I7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CLDN16Q9Y5I7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN16Q9Y5I7 DUSP8P5-201ENST00000422884 1815 ntBASIC20.78■□□□□ 0.92
CLDN16Q9Y5I7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CLDN16Q9Y5I7 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN16Q9Y5I7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN16Q9Y5I7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN16Q9Y5I7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN16Q9Y5I7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN16Q9Y5I7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.78■□□□□ 0.92
CLDN16Q9Y5I7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN16Q9Y5I7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN16Q9Y5I7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.77■□□□□ 0.92
CLDN16Q9Y5I7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.77■□□□□ 0.92
CLDN16Q9Y5I7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CLDN16Q9Y5I7 SUDS3P1-201ENST00000505831 966 ntBASIC20.77■□□□□ 0.92
CLDN16Q9Y5I7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CLDN16Q9Y5I7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.77■□□□□ 0.92
CLDN16Q9Y5I7 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN16Q9Y5I7 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN16Q9Y5I7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
CLDN16Q9Y5I7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CLDN16Q9Y5I7 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.91
CLDN16Q9Y5I7 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CLDN16Q9Y5I7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CLDN16Q9Y5I7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.76■□□□□ 0.91
CLDN16Q9Y5I7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.76■□□□□ 0.91
CLDN16Q9Y5I7 EDA-201ENST00000338901 1233 ntBASIC20.76■□□□□ 0.91
CLDN16Q9Y5I7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.76■□□□□ 0.91
CLDN16Q9Y5I7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.76■□□□□ 0.91
CLDN16Q9Y5I7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
CLDN16Q9Y5I7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN16Q9Y5I7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CLDN16Q9Y5I7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN16Q9Y5I7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN16Q9Y5I7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.75■□□□□ 0.91
CLDN16Q9Y5I7 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN16Q9Y5I7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CLDN16Q9Y5I7 AP001330.3-201ENST00000520123 633 ntBASIC20.75■□□□□ 0.91
CLDN16Q9Y5I7 AC005837.3-201ENST00000612163 286 ntBASIC20.75■□□□□ 0.91
CLDN16Q9Y5I7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN16Q9Y5I7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.75■□□□□ 0.91
CLDN16Q9Y5I7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
CLDN16Q9Y5I7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN16Q9Y5I7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN16Q9Y5I7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.74■□□□□ 0.91
CLDN16Q9Y5I7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CLDN16Q9Y5I7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CLDN16Q9Y5I7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLDN16Q9Y5I7 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.73■□□□□ 0.91
CLDN16Q9Y5I7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CLDN16Q9Y5I7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.73■□□□□ 0.91
CLDN16Q9Y5I7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CLDN16Q9Y5I7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CLDN16Q9Y5I7 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.73■□□□□ 0.91
CLDN16Q9Y5I7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.73■□□□□ 0.91
CLDN16Q9Y5I7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.73■□□□□ 0.91
CLDN16Q9Y5I7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.73■□□□□ 0.91
CLDN16Q9Y5I7 AC004687.1-201ENST00000579003 1625 ntBASIC20.73■□□□□ 0.91
CLDN16Q9Y5I7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CLDN16Q9Y5I7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CLDN16Q9Y5I7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN16Q9Y5I7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms