Protein–RNA interactions for Protein: Q9Y3Q8

TSC22D4, TSC22 domain family protein 4, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4Q9Y3Q8 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TSC22D4Q9Y3Q8 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TSC22D4Q9Y3Q8 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.48■■□□□ 1.03
TSC22D4Q9Y3Q8 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TSC22D4Q9Y3Q8 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
TSC22D4Q9Y3Q8 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TSC22D4Q9Y3Q8 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TSC22D4Q9Y3Q8 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
TSC22D4Q9Y3Q8 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TSC22D4Q9Y3Q8 GUSBP5-201ENST00000418136 578 ntBASIC21.47■■□□□ 1.03
TSC22D4Q9Y3Q8 TSPY9P-201ENST00000440215 945 ntBASIC21.47■■□□□ 1.03
TSC22D4Q9Y3Q8 TSPY11P-201ENST00000442607 1045 ntBASIC21.47■■□□□ 1.03
TSC22D4Q9Y3Q8 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TSC22D4Q9Y3Q8 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TSC22D4Q9Y3Q8 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TSC22D4Q9Y3Q8 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TSC22D4Q9Y3Q8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.46■■□□□ 1.03
TSC22D4Q9Y3Q8 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TSC22D4Q9Y3Q8 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.46■■□□□ 1.03
TSC22D4Q9Y3Q8 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TSC22D4Q9Y3Q8 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TSC22D4Q9Y3Q8 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
TSC22D4Q9Y3Q8 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TSC22D4Q9Y3Q8 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.46■■□□□ 1.03
TSC22D4Q9Y3Q8 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.46■■□□□ 1.03
TSC22D4Q9Y3Q8 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.46■■□□□ 1.03
TSC22D4Q9Y3Q8 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TSC22D4Q9Y3Q8 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.46■■□□□ 1.03
TSC22D4Q9Y3Q8 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TSC22D4Q9Y3Q8 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
TSC22D4Q9Y3Q8 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TSC22D4Q9Y3Q8 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.45■■□□□ 1.02
TSC22D4Q9Y3Q8 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TSC22D4Q9Y3Q8 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TSC22D4Q9Y3Q8 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.45■■□□□ 1.02
TSC22D4Q9Y3Q8 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.45■■□□□ 1.02
TSC22D4Q9Y3Q8 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TSC22D4Q9Y3Q8 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TSC22D4Q9Y3Q8 AL353803.4-201ENST00000565882 1934 ntBASIC21.45■■□□□ 1.02
TSC22D4Q9Y3Q8 AC009102.2-201ENST00000606772 1639 ntBASIC21.44■■□□□ 1.02
TSC22D4Q9Y3Q8 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
TSC22D4Q9Y3Q8 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TSC22D4Q9Y3Q8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.44■■□□□ 1.02
TSC22D4Q9Y3Q8 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TSC22D4Q9Y3Q8 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.44■■□□□ 1.02
TSC22D4Q9Y3Q8 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.44■■□□□ 1.02
TSC22D4Q9Y3Q8 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TSC22D4Q9Y3Q8 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
TSC22D4Q9Y3Q8 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.44■■□□□ 1.02
TSC22D4Q9Y3Q8 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
TSC22D4Q9Y3Q8 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TSC22D4Q9Y3Q8 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TSC22D4Q9Y3Q8 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
TSC22D4Q9Y3Q8 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TSC22D4Q9Y3Q8 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.43■■□□□ 1.02
TSC22D4Q9Y3Q8 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
TSC22D4Q9Y3Q8 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
TSC22D4Q9Y3Q8 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
TSC22D4Q9Y3Q8 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
TSC22D4Q9Y3Q8 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
TSC22D4Q9Y3Q8 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TSC22D4Q9Y3Q8 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TSC22D4Q9Y3Q8 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
TSC22D4Q9Y3Q8 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.43■■□□□ 1.02
TSC22D4Q9Y3Q8 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TSC22D4Q9Y3Q8 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TSC22D4Q9Y3Q8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TSC22D4Q9Y3Q8 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
TSC22D4Q9Y3Q8 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TSC22D4Q9Y3Q8 DUX4L4-201ENST00000566884 1269 ntBASIC21.42■■□□□ 1.02
TSC22D4Q9Y3Q8 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.42■■□□□ 1.02
TSC22D4Q9Y3Q8 LINC01529-204ENST00000636474 1715 ntBASIC21.42■■□□□ 1.02
TSC22D4Q9Y3Q8 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TSC22D4Q9Y3Q8 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
TSC22D4Q9Y3Q8 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
TSC22D4Q9Y3Q8 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.41■■□□□ 1.02
TSC22D4Q9Y3Q8 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TSC22D4Q9Y3Q8 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.41■■□□□ 1.02
TSC22D4Q9Y3Q8 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.41■■□□□ 1.02
TSC22D4Q9Y3Q8 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.41■■□□□ 1.02
TSC22D4Q9Y3Q8 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
TSC22D4Q9Y3Q8 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TSC22D4Q9Y3Q8 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.41■■□□□ 1.02
TSC22D4Q9Y3Q8 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.41■■□□□ 1.02
TSC22D4Q9Y3Q8 KRT16P3-201ENST00000439127 1283 ntBASIC21.41■■□□□ 1.02
TSC22D4Q9Y3Q8 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.41■■□□□ 1.02
TSC22D4Q9Y3Q8 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TSC22D4Q9Y3Q8 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.41■■□□□ 1.02
TSC22D4Q9Y3Q8 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
TSC22D4Q9Y3Q8 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TSC22D4Q9Y3Q8 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TSC22D4Q9Y3Q8 C17orf82-201ENST00000623772 1530 ntBASIC21.4■■□□□ 1.02
TSC22D4Q9Y3Q8 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TSC22D4Q9Y3Q8 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
TSC22D4Q9Y3Q8 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TSC22D4Q9Y3Q8 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.4■■□□□ 1.02
TSC22D4Q9Y3Q8 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TSC22D4Q9Y3Q8 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.4■■□□□ 1.02
TSC22D4Q9Y3Q8 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.4■■□□□ 1.02
TSC22D4Q9Y3Q8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms