Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH20Q9HBT6 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH20Q9HBT6 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH20Q9HBT6 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDH20Q9HBT6 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
CDH20Q9HBT6 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH20Q9HBT6 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.36■□□□□ 0.69
CDH20Q9HBT6 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH20Q9HBT6 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.35■□□□□ 0.69
CDH20Q9HBT6 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH20Q9HBT6 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CDH20Q9HBT6 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.35■□□□□ 0.69
CDH20Q9HBT6 AC133561.1-201ENST00000568600 2415 ntBASIC19.35■□□□□ 0.69
CDH20Q9HBT6 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH20Q9HBT6 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
CDH20Q9HBT6 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CDH20Q9HBT6 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDH20Q9HBT6 DUX4L19-201ENST00000557448 1267 ntBASIC19.35■□□□□ 0.69
CDH20Q9HBT6 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CDH20Q9HBT6 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CDH20Q9HBT6 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH20Q9HBT6 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CDH20Q9HBT6 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH20Q9HBT6 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH20Q9HBT6 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDH20Q9HBT6 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.34■□□□□ 0.69
CDH20Q9HBT6 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH20Q9HBT6 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH20Q9HBT6 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CDH20Q9HBT6 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.34■□□□□ 0.69
CDH20Q9HBT6 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.34■□□□□ 0.69
CDH20Q9HBT6 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDH20Q9HBT6 DUX4L4-201ENST00000566884 1269 ntBASIC19.34■□□□□ 0.69
CDH20Q9HBT6 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH20Q9HBT6 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDH20Q9HBT6 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH20Q9HBT6 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH20Q9HBT6 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.34■□□□□ 0.69
CDH20Q9HBT6 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CDH20Q9HBT6 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH20Q9HBT6 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CDH20Q9HBT6 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.34■□□□□ 0.69
CDH20Q9HBT6 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDH20Q9HBT6 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDH20Q9HBT6 AL353803.4-201ENST00000565882 1934 ntBASIC19.33■□□□□ 0.69
CDH20Q9HBT6 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDH20Q9HBT6 SYT6-210ENST00000641643 1587 ntBASIC19.33■□□□□ 0.69
CDH20Q9HBT6 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.33■□□□□ 0.69
CDH20Q9HBT6 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDH20Q9HBT6 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
CDH20Q9HBT6 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.33■□□□□ 0.68
CDH20Q9HBT6 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.33■□□□□ 0.68
CDH20Q9HBT6 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDH20Q9HBT6 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.33■□□□□ 0.68
CDH20Q9HBT6 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.33■□□□□ 0.68
CDH20Q9HBT6 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDH20Q9HBT6 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDH20Q9HBT6 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CDH20Q9HBT6 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.32■□□□□ 0.68
CDH20Q9HBT6 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH20Q9HBT6 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDH20Q9HBT6 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH20Q9HBT6 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH20Q9HBT6 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CDH20Q9HBT6 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
CDH20Q9HBT6 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.32■□□□□ 0.68
CDH20Q9HBT6 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH20Q9HBT6 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDH20Q9HBT6 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH20Q9HBT6 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CDH20Q9HBT6 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH20Q9HBT6 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH20Q9HBT6 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.32■□□□□ 0.68
CDH20Q9HBT6 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH20Q9HBT6 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH20Q9HBT6 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.32■□□□□ 0.68
CDH20Q9HBT6 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.32■□□□□ 0.68
CDH20Q9HBT6 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH20Q9HBT6 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH20Q9HBT6 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.31■□□□□ 0.68
CDH20Q9HBT6 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH20Q9HBT6 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.31■□□□□ 0.68
CDH20Q9HBT6 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDH20Q9HBT6 AC006455.2-201ENST00000429931 906 ntBASIC19.31■□□□□ 0.68
CDH20Q9HBT6 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDH20Q9HBT6 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.31■□□□□ 0.68
CDH20Q9HBT6 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH20Q9HBT6 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH20Q9HBT6 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH20Q9HBT6 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.31■□□□□ 0.68
CDH20Q9HBT6 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.31■□□□□ 0.68
CDH20Q9HBT6 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDH20Q9HBT6 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDH20Q9HBT6 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CDH20Q9HBT6 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.3■□□□□ 0.68
CDH20Q9HBT6 AC012676.1-201ENST00000574705 1949 ntBASIC19.3■□□□□ 0.68
CDH20Q9HBT6 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.3■□□□□ 0.68
CDH20Q9HBT6 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDH20Q9HBT6 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDH20Q9HBT6 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms