Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Raf1Q99N57 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Raf1Q99N57 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Raf1Q99N57 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Raf1Q99N57 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Raf1Q99N57 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Raf1Q99N57 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Raf1Q99N57 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Raf1Q99N57 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.68■□□□□ 0.42
Raf1Q99N57 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Raf1Q99N57 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Raf1Q99N57 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Raf1Q99N57 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.67■□□□□ 0.42
Raf1Q99N57 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Raf1Q99N57 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Raf1Q99N57 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.67■□□□□ 0.42
Raf1Q99N57 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Raf1Q99N57 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Raf1Q99N57 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.67■□□□□ 0.42
Raf1Q99N57 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Raf1Q99N57 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Raf1Q99N57 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Raf1Q99N57 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.66■□□□□ 0.42
Raf1Q99N57 Serp2-204ENSMUST00000228055 705 ntBASIC17.66■□□□□ 0.42
Raf1Q99N57 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Raf1Q99N57 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Raf1Q99N57 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.66■□□□□ 0.42
Raf1Q99N57 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Raf1Q99N57 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Raf1Q99N57 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Raf1Q99N57 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Raf1Q99N57 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Raf1Q99N57 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Raf1Q99N57 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Raf1Q99N57 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Raf1Q99N57 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Raf1Q99N57 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Raf1Q99N57 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Raf1Q99N57 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Raf1Q99N57 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Raf1Q99N57 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Raf1Q99N57 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Raf1Q99N57 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Raf1Q99N57 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.64■□□□□ 0.41
Raf1Q99N57 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Raf1Q99N57 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Raf1Q99N57 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Raf1Q99N57 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.64■□□□□ 0.41
Raf1Q99N57 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Raf1Q99N57 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Raf1Q99N57 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Raf1Q99N57 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Raf1Q99N57 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Raf1Q99N57 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Raf1Q99N57 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Raf1Q99N57 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Raf1Q99N57 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Raf1Q99N57 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Raf1Q99N57 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Raf1Q99N57 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Raf1Q99N57 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.63■□□□□ 0.41
Raf1Q99N57 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.63■□□□□ 0.41
Raf1Q99N57 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Raf1Q99N57 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Raf1Q99N57 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Raf1Q99N57 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Raf1Q99N57 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.63■□□□□ 0.41
Raf1Q99N57 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Raf1Q99N57 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Raf1Q99N57 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Raf1Q99N57 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Raf1Q99N57 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Raf1Q99N57 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Raf1Q99N57 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Raf1Q99N57 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Raf1Q99N57 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Raf1Q99N57 Gm22238-201ENSMUST00000175222 88 ntBASIC17.62■□□□□ 0.41
Raf1Q99N57 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.62■□□□□ 0.41
Raf1Q99N57 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Raf1Q99N57 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Raf1Q99N57 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Raf1Q99N57 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Raf1Q99N57 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Raf1Q99N57 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Raf1Q99N57 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Raf1Q99N57 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Raf1Q99N57 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Raf1Q99N57 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Raf1Q99N57 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Raf1Q99N57 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Raf1Q99N57 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Raf1Q99N57 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.61■□□□□ 0.41
Raf1Q99N57 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.61■□□□□ 0.41
Raf1Q99N57 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.61■□□□□ 0.41
Raf1Q99N57 Gm40881-201ENSMUST00000223397 166 ntBASIC17.61■□□□□ 0.41
Raf1Q99N57 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Raf1Q99N57 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Raf1Q99N57 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.61■□□□□ 0.41
Raf1Q99N57 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.61■□□□□ 0.41
Raf1Q99N57 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms