Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ALMS1Q8TCU4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
ALMS1Q8TCU4 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ALMS1Q8TCU4 MDK-213ENST00000617138 635 ntTSL 2 BASIC15.25■□□□□ 0.03
ALMS1Q8TCU4 SHF-206ENST00000560471 2499 ntTSL 5 BASIC15.25■□□□□ 0.03
ALMS1Q8TCU4 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
ALMS1Q8TCU4 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ALMS1Q8TCU4 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
ALMS1Q8TCU4 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ALMS1Q8TCU4 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
ALMS1Q8TCU4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ALMS1Q8TCU4 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ALMS1Q8TCU4 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
ALMS1Q8TCU4 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ALMS1Q8TCU4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC15.25■□□□□ 0.03
ALMS1Q8TCU4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC15.25■□□□□ 0.03
ALMS1Q8TCU4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ALMS1Q8TCU4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
ALMS1Q8TCU4 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC15.24■□□□□ 0.03
ALMS1Q8TCU4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ALMS1Q8TCU4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ALMS1Q8TCU4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC15.24■□□□□ 0.03
ALMS1Q8TCU4 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
ALMS1Q8TCU4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ALMS1Q8TCU4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ALMS1Q8TCU4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
ALMS1Q8TCU4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
ALMS1Q8TCU4 AC098590.1-201ENST00000468126 897 ntBASIC15.24■□□□□ 0.03
ALMS1Q8TCU4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ALMS1Q8TCU4 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
ALMS1Q8TCU4 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC15.23■□□□□ 0.03
ALMS1Q8TCU4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
ALMS1Q8TCU4 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ALMS1Q8TCU4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC15.23■□□□□ 0.03
ALMS1Q8TCU4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ALMS1Q8TCU4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC15.23■□□□□ 0.03
ALMS1Q8TCU4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC15.23■□□□□ 0.03
ALMS1Q8TCU4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
ALMS1Q8TCU4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ALMS1Q8TCU4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC15.23■□□□□ 0.03
ALMS1Q8TCU4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ALMS1Q8TCU4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC15.23■□□□□ 0.03
ALMS1Q8TCU4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ALMS1Q8TCU4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC15.23■□□□□ 0.03
ALMS1Q8TCU4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC15.23■□□□□ 0.03
ALMS1Q8TCU4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ALMS1Q8TCU4 UBE2DNL-204ENST00000602536 740 ntBASIC15.23■□□□□ 0.03
ALMS1Q8TCU4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC15.23■□□□□ 0.03
ALMS1Q8TCU4 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
ALMS1Q8TCU4 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ALMS1Q8TCU4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ALMS1Q8TCU4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC15.23■□□□□ 0.03
ALMS1Q8TCU4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
ALMS1Q8TCU4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ALMS1Q8TCU4 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC15.22■□□□□ 0.03
ALMS1Q8TCU4 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ALMS1Q8TCU4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ALMS1Q8TCU4 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ALMS1Q8TCU4 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC15.22■□□□□ 0.03
ALMS1Q8TCU4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC15.22■□□□□ 0.03
ALMS1Q8TCU4 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ALMS1Q8TCU4 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ALMS1Q8TCU4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
ALMS1Q8TCU4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ALMS1Q8TCU4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC15.22■□□□□ 0.03
ALMS1Q8TCU4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ALMS1Q8TCU4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ALMS1Q8TCU4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ALMS1Q8TCU4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ALMS1Q8TCU4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ALMS1Q8TCU4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ALMS1Q8TCU4 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC15.21■□□□□ 0.03
ALMS1Q8TCU4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ALMS1Q8TCU4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ALMS1Q8TCU4 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ALMS1Q8TCU4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC15.21■□□□□ 0.03
ALMS1Q8TCU4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ALMS1Q8TCU4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC15.21■□□□□ 0.03
ALMS1Q8TCU4 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ALMS1Q8TCU4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC15.21■□□□□ 0.03
ALMS1Q8TCU4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ALMS1Q8TCU4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ALMS1Q8TCU4 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ALMS1Q8TCU4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC15.21■□□□□ 0.03
ALMS1Q8TCU4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC15.21■□□□□ 0.03
ALMS1Q8TCU4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC15.21■□□□□ 0.03
ALMS1Q8TCU4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
ALMS1Q8TCU4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
ALMS1Q8TCU4 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC15.21■□□□□ 0.02
ALMS1Q8TCU4 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ALMS1Q8TCU4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC15.21■□□□□ 0.02
ALMS1Q8TCU4 AL161729.1-201ENST00000604104 1402 ntBASIC15.2■□□□□ 0.02
ALMS1Q8TCU4 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
ALMS1Q8TCU4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC15.2■□□□□ 0.02
ALMS1Q8TCU4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC15.2■□□□□ 0.02
ALMS1Q8TCU4 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC15.2■□□□□ 0.02
ALMS1Q8TCU4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ALMS1Q8TCU4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
ALMS1Q8TCU4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
ALMS1Q8TCU4 AC005181.1-201ENST00000604782 1256 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms