Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
KRT78Q8N1N4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
KRT78Q8N1N4 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.39■■□□□ 1.02
KRT78Q8N1N4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.39■■□□□ 1.02
KRT78Q8N1N4 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
KRT78Q8N1N4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.39■■□□□ 1.01
KRT78Q8N1N4 AC009086.3-201ENST00000623486 1008 ntBASIC21.39■■□□□ 1.01
KRT78Q8N1N4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
KRT78Q8N1N4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
KRT78Q8N1N4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
KRT78Q8N1N4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
KRT78Q8N1N4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.38■■□□□ 1.01
KRT78Q8N1N4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.38■■□□□ 1.01
KRT78Q8N1N4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.38■■□□□ 1.01
KRT78Q8N1N4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.38■■□□□ 1.01
KRT78Q8N1N4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
KRT78Q8N1N4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.38■■□□□ 1.01
KRT78Q8N1N4 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.38■■□□□ 1.01
KRT78Q8N1N4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.38■■□□□ 1.01
KRT78Q8N1N4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.38■■□□□ 1.01
KRT78Q8N1N4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
KRT78Q8N1N4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
KRT78Q8N1N4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
KRT78Q8N1N4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
KRT78Q8N1N4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
KRT78Q8N1N4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.38■■□□□ 1.01
KRT78Q8N1N4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KRT78Q8N1N4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.37■■□□□ 1.01
KRT78Q8N1N4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KRT78Q8N1N4 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.37■■□□□ 1.01
KRT78Q8N1N4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KRT78Q8N1N4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KRT78Q8N1N4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KRT78Q8N1N4 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
KRT78Q8N1N4 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
KRT78Q8N1N4 C9orf163-202ENST00000624034 2573 ntBASIC21.37■■□□□ 1.01
KRT78Q8N1N4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
KRT78Q8N1N4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.37■■□□□ 1.01
KRT78Q8N1N4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.37■■□□□ 1.01
KRT78Q8N1N4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.37■■□□□ 1.01
KRT78Q8N1N4 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.37■■□□□ 1.01
KRT78Q8N1N4 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
KRT78Q8N1N4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.37■■□□□ 1.01
KRT78Q8N1N4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KRT78Q8N1N4 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
KRT78Q8N1N4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
KRT78Q8N1N4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
KRT78Q8N1N4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
KRT78Q8N1N4 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
KRT78Q8N1N4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KRT78Q8N1N4 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.36■■□□□ 1.01
KRT78Q8N1N4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
KRT78Q8N1N4 AC012676.1-201ENST00000574705 1949 ntBASIC21.36■■□□□ 1.01
KRT78Q8N1N4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.36■■□□□ 1.01
KRT78Q8N1N4 SRD5A1P1-201ENST00000442297 786 ntBASIC21.36■■□□□ 1.01
KRT78Q8N1N4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.36■■□□□ 1.01
KRT78Q8N1N4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.36■■□□□ 1.01
KRT78Q8N1N4 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.36■■□□□ 1.01
KRT78Q8N1N4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.36■■□□□ 1.01
KRT78Q8N1N4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.36■■□□□ 1.01
KRT78Q8N1N4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
KRT78Q8N1N4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
KRT78Q8N1N4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
KRT78Q8N1N4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KRT78Q8N1N4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.35■■□□□ 1.01
KRT78Q8N1N4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.35■■□□□ 1.01
KRT78Q8N1N4 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KRT78Q8N1N4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
KRT78Q8N1N4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
KRT78Q8N1N4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.34■■□□□ 1.01
KRT78Q8N1N4 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
KRT78Q8N1N4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
KRT78Q8N1N4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
KRT78Q8N1N4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
KRT78Q8N1N4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
KRT78Q8N1N4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.34■■□□□ 1.01
KRT78Q8N1N4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
KRT78Q8N1N4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.34■■□□□ 1.01
KRT78Q8N1N4 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.34■■□□□ 1.01
KRT78Q8N1N4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
KRT78Q8N1N4 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.34■■□□□ 1.01
KRT78Q8N1N4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
KRT78Q8N1N4 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.34■■□□□ 1.01
KRT78Q8N1N4 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.34■■□□□ 1.01
KRT78Q8N1N4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.34■■□□□ 1.01
KRT78Q8N1N4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.34■■□□□ 1.01
KRT78Q8N1N4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
KRT78Q8N1N4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
KRT78Q8N1N4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.34■■□□□ 1.01
KRT78Q8N1N4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
KRT78Q8N1N4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
KRT78Q8N1N4 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
KRT78Q8N1N4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.33■■□□□ 1.01
KRT78Q8N1N4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.33■■□□□ 1.01
KRT78Q8N1N4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.33■■□□□ 1.01
KRT78Q8N1N4 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.33■■□□□ 1.01
KRT78Q8N1N4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.33■■□□□ 1.01
KRT78Q8N1N4 AL512631.2-201ENST00000604634 923 ntBASIC21.33■■□□□ 1.01
KRT78Q8N1N4 AC092171.4-201ENST00000609130 632 ntBASIC21.33■■□□□ 1.01
KRT78Q8N1N4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms