Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC22.23■■□□□ 1.15
TMEFF1Q8IYR6 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.23■■□□□ 1.15
TMEFF1Q8IYR6 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC22.23■■□□□ 1.15
TMEFF1Q8IYR6 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.23■■□□□ 1.15
TMEFF1Q8IYR6 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.23■■□□□ 1.15
TMEFF1Q8IYR6 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TMEFF1Q8IYR6 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TMEFF1Q8IYR6 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TMEFF1Q8IYR6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TMEFF1Q8IYR6 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
TMEFF1Q8IYR6 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
TMEFF1Q8IYR6 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
TMEFF1Q8IYR6 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TMEFF1Q8IYR6 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.22■■□□□ 1.15
TMEFF1Q8IYR6 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC22.22■■□□□ 1.15
TMEFF1Q8IYR6 DENND3-207ENST00000518347 850 ntTSL 2 BASIC22.22■■□□□ 1.15
TMEFF1Q8IYR6 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TMEFF1Q8IYR6 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TMEFF1Q8IYR6 MPST-204ENST00000404393 1329 ntTSL 5 BASIC22.22■■□□□ 1.15
TMEFF1Q8IYR6 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TMEFF1Q8IYR6 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC22.22■■□□□ 1.15
TMEFF1Q8IYR6 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
TMEFF1Q8IYR6 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TMEFF1Q8IYR6 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
TMEFF1Q8IYR6 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
TMEFF1Q8IYR6 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
TMEFF1Q8IYR6 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.21■■□□□ 1.15
TMEFF1Q8IYR6 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
TMEFF1Q8IYR6 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
TMEFF1Q8IYR6 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TMEFF1Q8IYR6 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.21■■□□□ 1.15
TMEFF1Q8IYR6 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC22.21■■□□□ 1.15
TMEFF1Q8IYR6 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
TMEFF1Q8IYR6 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TMEFF1Q8IYR6 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TMEFF1Q8IYR6 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TMEFF1Q8IYR6 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
TMEFF1Q8IYR6 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
TMEFF1Q8IYR6 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TMEFF1Q8IYR6 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
TMEFF1Q8IYR6 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.2■■□□□ 1.14
TMEFF1Q8IYR6 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.2■■□□□ 1.14
TMEFF1Q8IYR6 AC105233.4-201ENST00000642045 216 ntBASIC22.2■■□□□ 1.14
TMEFF1Q8IYR6 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
TMEFF1Q8IYR6 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC22.2■■□□□ 1.14
TMEFF1Q8IYR6 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.2■■□□□ 1.14
TMEFF1Q8IYR6 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
TMEFF1Q8IYR6 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.2■■□□□ 1.14
TMEFF1Q8IYR6 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
TMEFF1Q8IYR6 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TMEFF1Q8IYR6 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TMEFF1Q8IYR6 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.19■■□□□ 1.14
TMEFF1Q8IYR6 FP325331.1-202ENST00000623531 1380 ntBASIC22.19■■□□□ 1.14
TMEFF1Q8IYR6 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC22.19■■□□□ 1.14
TMEFF1Q8IYR6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.19■■□□□ 1.14
TMEFF1Q8IYR6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.19■■□□□ 1.14
TMEFF1Q8IYR6 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.19■■□□□ 1.14
TMEFF1Q8IYR6 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TMEFF1Q8IYR6 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TMEFF1Q8IYR6 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TMEFF1Q8IYR6 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
TMEFF1Q8IYR6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
TMEFF1Q8IYR6 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.18■■□□□ 1.14
TMEFF1Q8IYR6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TMEFF1Q8IYR6 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TMEFF1Q8IYR6 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
TMEFF1Q8IYR6 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TMEFF1Q8IYR6 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TMEFF1Q8IYR6 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TMEFF1Q8IYR6 HLA-L-209ENST00000420110 1011 ntBASIC22.18■■□□□ 1.14
TMEFF1Q8IYR6 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.18■■□□□ 1.14
TMEFF1Q8IYR6 AP005435.1-201ENST00000529293 1178 ntBASIC22.18■■□□□ 1.14
TMEFF1Q8IYR6 DUX4L4-201ENST00000566884 1269 ntBASIC22.18■■□□□ 1.14
TMEFF1Q8IYR6 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.17■■□□□ 1.14
TMEFF1Q8IYR6 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TMEFF1Q8IYR6 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TMEFF1Q8IYR6 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.17■■□□□ 1.14
TMEFF1Q8IYR6 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.17■■□□□ 1.14
TMEFF1Q8IYR6 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC22.17■■□□□ 1.14
TMEFF1Q8IYR6 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TMEFF1Q8IYR6 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.17■■□□□ 1.14
TMEFF1Q8IYR6 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.17■■□□□ 1.14
TMEFF1Q8IYR6 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC22.17■■□□□ 1.14
TMEFF1Q8IYR6 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TMEFF1Q8IYR6 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
TMEFF1Q8IYR6 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TMEFF1Q8IYR6 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
TMEFF1Q8IYR6 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TMEFF1Q8IYR6 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.16■■□□□ 1.14
TMEFF1Q8IYR6 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
TMEFF1Q8IYR6 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.16■■□□□ 1.14
TMEFF1Q8IYR6 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TMEFF1Q8IYR6 AC138932.3-201ENST00000567634 1902 ntBASIC22.16■■□□□ 1.14
TMEFF1Q8IYR6 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TMEFF1Q8IYR6 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.15■■□□□ 1.14
TMEFF1Q8IYR6 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.15■■□□□ 1.14
TMEFF1Q8IYR6 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
TMEFF1Q8IYR6 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC22.15■■□□□ 1.14
TMEFF1Q8IYR6 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
TMEFF1Q8IYR6 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms