Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 MIR3181-201ENST00000578512 73 ntBASIC23.4■■□□□ 1.34
SCUBE3Q8IX30 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
SCUBE3Q8IX30 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
SCUBE3Q8IX30 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.39■■□□□ 1.34
SCUBE3Q8IX30 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
SCUBE3Q8IX30 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.39■■□□□ 1.34
SCUBE3Q8IX30 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.39■■□□□ 1.34
SCUBE3Q8IX30 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SCUBE3Q8IX30 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.39■■□□□ 1.33
SCUBE3Q8IX30 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.39■■□□□ 1.33
SCUBE3Q8IX30 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.39■■□□□ 1.33
SCUBE3Q8IX30 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
SCUBE3Q8IX30 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.39■■□□□ 1.33
SCUBE3Q8IX30 pRNA.6-201ENST00000610482 90 ntBASIC23.39■■□□□ 1.33
SCUBE3Q8IX30 pRNA.5-201ENST00000612139 90 ntBASIC23.39■■□□□ 1.33
SCUBE3Q8IX30 pRNA.11-201ENST00000618423 90 ntBASIC23.39■■□□□ 1.33
SCUBE3Q8IX30 pRNA.13-201ENST00000619112 90 ntBASIC23.39■■□□□ 1.33
SCUBE3Q8IX30 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
SCUBE3Q8IX30 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.33
SCUBE3Q8IX30 SYT6-210ENST00000641643 1587 ntBASIC23.39■■□□□ 1.33
SCUBE3Q8IX30 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.39■■□□□ 1.33
SCUBE3Q8IX30 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SCUBE3Q8IX30 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.39■■□□□ 1.33
SCUBE3Q8IX30 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SCUBE3Q8IX30 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SCUBE3Q8IX30 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SCUBE3Q8IX30 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SCUBE3Q8IX30 SERBP1P1-201ENST00000396021 1160 ntBASIC23.38■■□□□ 1.33
SCUBE3Q8IX30 DUX4L19-201ENST00000557448 1267 ntBASIC23.38■■□□□ 1.33
SCUBE3Q8IX30 AL499627.2-201ENST00000606283 725 ntBASIC23.38■■□□□ 1.33
SCUBE3Q8IX30 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.38■■□□□ 1.33
SCUBE3Q8IX30 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.38■■□□□ 1.33
SCUBE3Q8IX30 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
SCUBE3Q8IX30 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
SCUBE3Q8IX30 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SCUBE3Q8IX30 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SCUBE3Q8IX30 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.38■■□□□ 1.33
SCUBE3Q8IX30 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
SCUBE3Q8IX30 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.37■■□□□ 1.33
SCUBE3Q8IX30 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.37■■□□□ 1.33
SCUBE3Q8IX30 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SCUBE3Q8IX30 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SCUBE3Q8IX30 UNC93B3-201ENST00000308076 687 ntBASIC23.37■■□□□ 1.33
SCUBE3Q8IX30 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SCUBE3Q8IX30 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SCUBE3Q8IX30 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
SCUBE3Q8IX30 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
SCUBE3Q8IX30 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SCUBE3Q8IX30 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.37■■□□□ 1.33
SCUBE3Q8IX30 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
SCUBE3Q8IX30 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SCUBE3Q8IX30 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SCUBE3Q8IX30 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
SCUBE3Q8IX30 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SCUBE3Q8IX30 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.36■■□□□ 1.33
SCUBE3Q8IX30 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SCUBE3Q8IX30 AC096631.2-201ENST00000436136 790 ntBASIC23.36■■□□□ 1.33
SCUBE3Q8IX30 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.36■■□□□ 1.33
SCUBE3Q8IX30 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
SCUBE3Q8IX30 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.36■■□□□ 1.33
SCUBE3Q8IX30 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.35■■□□□ 1.33
SCUBE3Q8IX30 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
SCUBE3Q8IX30 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SCUBE3Q8IX30 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SCUBE3Q8IX30 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SCUBE3Q8IX30 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.35■■□□□ 1.33
SCUBE3Q8IX30 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.35■■□□□ 1.33
SCUBE3Q8IX30 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.35■■□□□ 1.33
SCUBE3Q8IX30 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SCUBE3Q8IX30 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.35■■□□□ 1.33
SCUBE3Q8IX30 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SCUBE3Q8IX30 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SCUBE3Q8IX30 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.35■■□□□ 1.33
SCUBE3Q8IX30 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SCUBE3Q8IX30 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SCUBE3Q8IX30 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
SCUBE3Q8IX30 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
SCUBE3Q8IX30 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SCUBE3Q8IX30 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.34■■□□□ 1.33
SCUBE3Q8IX30 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SCUBE3Q8IX30 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
SCUBE3Q8IX30 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SCUBE3Q8IX30 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
SCUBE3Q8IX30 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.33■■□□□ 1.33
SCUBE3Q8IX30 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SCUBE3Q8IX30 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SCUBE3Q8IX30 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.33
SCUBE3Q8IX30 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SCUBE3Q8IX30 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.33■■□□□ 1.33
SCUBE3Q8IX30 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SCUBE3Q8IX30 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.33■■□□□ 1.33
SCUBE3Q8IX30 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.33■■□□□ 1.33
SCUBE3Q8IX30 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SCUBE3Q8IX30 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SCUBE3Q8IX30 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.33■■□□□ 1.33
SCUBE3Q8IX30 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.33■■□□□ 1.32
SCUBE3Q8IX30 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
SCUBE3Q8IX30 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.32■■□□□ 1.32
SCUBE3Q8IX30 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SCUBE3Q8IX30 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms