Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Lysmd4Q8CC84 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.79■□□□□ 0.44
Lysmd4Q8CC84 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.79■□□□□ 0.44
Lysmd4Q8CC84 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.79■□□□□ 0.44
Lysmd4Q8CC84 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lysmd4Q8CC84 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lysmd4Q8CC84 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lysmd4Q8CC84 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lysmd4Q8CC84 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Lysmd4Q8CC84 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Lysmd4Q8CC84 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lysmd4Q8CC84 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lysmd4Q8CC84 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Lysmd4Q8CC84 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lysmd4Q8CC84 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lysmd4Q8CC84 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lysmd4Q8CC84 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lysmd4Q8CC84 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Lysmd4Q8CC84 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Lysmd4Q8CC84 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.77■□□□□ 0.44
Lysmd4Q8CC84 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.77■□□□□ 0.44
Lysmd4Q8CC84 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Lysmd4Q8CC84 Golph3-205ENSMUST00000228671 2842 ntBASIC17.77■□□□□ 0.44
Lysmd4Q8CC84 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lysmd4Q8CC84 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lysmd4Q8CC84 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lysmd4Q8CC84 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lysmd4Q8CC84 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lysmd4Q8CC84 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Lysmd4Q8CC84 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lysmd4Q8CC84 Gm45444-201ENSMUST00000211394 898 ntBASIC17.76■□□□□ 0.43
Lysmd4Q8CC84 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.76■□□□□ 0.43
Lysmd4Q8CC84 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lysmd4Q8CC84 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lysmd4Q8CC84 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Lysmd4Q8CC84 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lysmd4Q8CC84 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
Lysmd4Q8CC84 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lysmd4Q8CC84 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lysmd4Q8CC84 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lysmd4Q8CC84 Gm7143-201ENSMUST00000222811 859 ntBASIC17.75■□□□□ 0.43
Lysmd4Q8CC84 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lysmd4Q8CC84 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lysmd4Q8CC84 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Lysmd4Q8CC84 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Lysmd4Q8CC84 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lysmd4Q8CC84 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.75■□□□□ 0.43
Lysmd4Q8CC84 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lysmd4Q8CC84 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lysmd4Q8CC84 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lysmd4Q8CC84 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lysmd4Q8CC84 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lysmd4Q8CC84 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lysmd4Q8CC84 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lysmd4Q8CC84 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Lysmd4Q8CC84 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lysmd4Q8CC84 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lysmd4Q8CC84 Cap2-205ENSMUST00000225824 1634 ntBASIC17.74■□□□□ 0.43
Lysmd4Q8CC84 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.74■□□□□ 0.43
Lysmd4Q8CC84 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lysmd4Q8CC84 Gm10399-202ENSMUST00000202768 748 ntBASIC17.74■□□□□ 0.43
Lysmd4Q8CC84 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lysmd4Q8CC84 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lysmd4Q8CC84 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lysmd4Q8CC84 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lysmd4Q8CC84 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lysmd4Q8CC84 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lysmd4Q8CC84 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lysmd4Q8CC84 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lysmd4Q8CC84 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lysmd4Q8CC84 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lysmd4Q8CC84 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Lysmd4Q8CC84 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lysmd4Q8CC84 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lysmd4Q8CC84 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lysmd4Q8CC84 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lysmd4Q8CC84 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lysmd4Q8CC84 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lysmd4Q8CC84 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.73■□□□□ 0.43
Lysmd4Q8CC84 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lysmd4Q8CC84 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lysmd4Q8CC84 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.73■□□□□ 0.43
Lysmd4Q8CC84 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Lysmd4Q8CC84 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.72■□□□□ 0.43
Lysmd4Q8CC84 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lysmd4Q8CC84 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.72■□□□□ 0.43
Lysmd4Q8CC84 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.72■□□□□ 0.43
Lysmd4Q8CC84 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Lysmd4Q8CC84 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lysmd4Q8CC84 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lysmd4Q8CC84 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lysmd4Q8CC84 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lysmd4Q8CC84 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.72■□□□□ 0.43
Lysmd4Q8CC84 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lysmd4Q8CC84 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lysmd4Q8CC84 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Lysmd4Q8CC84 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lysmd4Q8CC84 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lysmd4Q8CC84 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Lysmd4Q8CC84 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms