Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nop53Q8BK35 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nop53Q8BK35 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.17■□□□□ 0.98
Nop53Q8BK35 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.17■□□□□ 0.98
Nop53Q8BK35 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.17■□□□□ 0.98
Nop53Q8BK35 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Nop53Q8BK35 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Nop53Q8BK35 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nop53Q8BK35 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nop53Q8BK35 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC21.16■□□□□ 0.98
Nop53Q8BK35 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nop53Q8BK35 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Nop53Q8BK35 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Nop53Q8BK35 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Nop53Q8BK35 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Nop53Q8BK35 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Nop53Q8BK35 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Nop53Q8BK35 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.14■□□□□ 0.97
Nop53Q8BK35 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.14■□□□□ 0.97
Nop53Q8BK35 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nop53Q8BK35 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC21.14■□□□□ 0.97
Nop53Q8BK35 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Nop53Q8BK35 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Nop53Q8BK35 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nop53Q8BK35 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
Nop53Q8BK35 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Nop53Q8BK35 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nop53Q8BK35 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nop53Q8BK35 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nop53Q8BK35 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nop53Q8BK35 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nop53Q8BK35 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nop53Q8BK35 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nop53Q8BK35 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Nop53Q8BK35 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Nop53Q8BK35 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Nop53Q8BK35 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Nop53Q8BK35 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nop53Q8BK35 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nop53Q8BK35 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nop53Q8BK35 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.12■□□□□ 0.97
Nop53Q8BK35 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Nop53Q8BK35 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Nop53Q8BK35 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nop53Q8BK35 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Nop53Q8BK35 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nop53Q8BK35 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nop53Q8BK35 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nop53Q8BK35 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nop53Q8BK35 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nop53Q8BK35 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nop53Q8BK35 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nop53Q8BK35 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nop53Q8BK35 Gm7417-201ENSMUST00000192950 473 ntBASIC21.11■□□□□ 0.97
Nop53Q8BK35 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
Nop53Q8BK35 Golph3-202ENSMUST00000226517 2359 ntBASIC21.11■□□□□ 0.97
Nop53Q8BK35 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nop53Q8BK35 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nop53Q8BK35 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nop53Q8BK35 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nop53Q8BK35 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nop53Q8BK35 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.1■□□□□ 0.97
Nop53Q8BK35 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.1■□□□□ 0.97
Nop53Q8BK35 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nop53Q8BK35 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nop53Q8BK35 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nop53Q8BK35 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nop53Q8BK35 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Nop53Q8BK35 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nop53Q8BK35 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nop53Q8BK35 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Nop53Q8BK35 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nop53Q8BK35 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nop53Q8BK35 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nop53Q8BK35 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.09■□□□□ 0.97
Nop53Q8BK35 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nop53Q8BK35 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.09■□□□□ 0.97
Nop53Q8BK35 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nop53Q8BK35 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nop53Q8BK35 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nop53Q8BK35 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nop53Q8BK35 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nop53Q8BK35 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nop53Q8BK35 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nop53Q8BK35 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nop53Q8BK35 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Nop53Q8BK35 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.08■□□□□ 0.97
Nop53Q8BK35 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
Nop53Q8BK35 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nop53Q8BK35 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nop53Q8BK35 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nop53Q8BK35 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Nop53Q8BK35 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nop53Q8BK35 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.07■□□□□ 0.96
Nop53Q8BK35 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.07■□□□□ 0.96
Nop53Q8BK35 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.07■□□□□ 0.96
Nop53Q8BK35 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nop53Q8BK35 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.07■□□□□ 0.96
Nop53Q8BK35 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nop53Q8BK35 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms