Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Usp1Q8BJQ2 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp1Q8BJQ2 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.07■□□□□ 0.96
Usp1Q8BJQ2 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp1Q8BJQ2 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp1Q8BJQ2 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp1Q8BJQ2 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp1Q8BJQ2 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp1Q8BJQ2 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp1Q8BJQ2 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.06■□□□□ 0.96
Usp1Q8BJQ2 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Usp1Q8BJQ2 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp1Q8BJQ2 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp1Q8BJQ2 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp1Q8BJQ2 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.05■□□□□ 0.96
Usp1Q8BJQ2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp1Q8BJQ2 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Usp1Q8BJQ2 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Usp1Q8BJQ2 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Usp1Q8BJQ2 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp1Q8BJQ2 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.04■□□□□ 0.96
Usp1Q8BJQ2 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.04■□□□□ 0.96
Usp1Q8BJQ2 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Usp1Q8BJQ2 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp1Q8BJQ2 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp1Q8BJQ2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Usp1Q8BJQ2 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp1Q8BJQ2 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.04■□□□□ 0.96
Usp1Q8BJQ2 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.04■□□□□ 0.96
Usp1Q8BJQ2 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp1Q8BJQ2 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.03■□□□□ 0.96
Usp1Q8BJQ2 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp1Q8BJQ2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp1Q8BJQ2 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
Usp1Q8BJQ2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp1Q8BJQ2 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp1Q8BJQ2 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp1Q8BJQ2 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Usp1Q8BJQ2 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp1Q8BJQ2 Gm10033-202ENSMUST00000211874 928 ntBASIC21.02■□□□□ 0.96
Usp1Q8BJQ2 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp1Q8BJQ2 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp1Q8BJQ2 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp1Q8BJQ2 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Usp1Q8BJQ2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp1Q8BJQ2 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp1Q8BJQ2 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Usp1Q8BJQ2 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Usp1Q8BJQ2 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Usp1Q8BJQ2 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC21.01■□□□□ 0.95
Usp1Q8BJQ2 Gm37179-201ENSMUST00000194862 823 ntBASIC21.01■□□□□ 0.95
Usp1Q8BJQ2 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp1Q8BJQ2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp1Q8BJQ2 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp1Q8BJQ2 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp1Q8BJQ2 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp1Q8BJQ2 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21■□□□□ 0.95
Usp1Q8BJQ2 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp1Q8BJQ2 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp1Q8BJQ2 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Usp1Q8BJQ2 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Usp1Q8BJQ2 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Usp1Q8BJQ2 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.99■□□□□ 0.95
Usp1Q8BJQ2 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
Usp1Q8BJQ2 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Usp1Q8BJQ2 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.99■□□□□ 0.95
Usp1Q8BJQ2 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.99■□□□□ 0.95
Usp1Q8BJQ2 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.99■□□□□ 0.95
Usp1Q8BJQ2 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.99■□□□□ 0.95
Usp1Q8BJQ2 Gm42778-201ENSMUST00000199644 553 ntBASIC20.99■□□□□ 0.95
Usp1Q8BJQ2 AV356131-201ENSMUST00000206201 750 ntBASIC20.99■□□□□ 0.95
Usp1Q8BJQ2 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.99■□□□□ 0.95
Usp1Q8BJQ2 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp1Q8BJQ2 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp1Q8BJQ2 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp1Q8BJQ2 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.99■□□□□ 0.95
Usp1Q8BJQ2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp1Q8BJQ2 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Usp1Q8BJQ2 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Usp1Q8BJQ2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp1Q8BJQ2 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.98■□□□□ 0.95
Usp1Q8BJQ2 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp1Q8BJQ2 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp1Q8BJQ2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp1Q8BJQ2 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp1Q8BJQ2 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp1Q8BJQ2 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp1Q8BJQ2 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Usp1Q8BJQ2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
Usp1Q8BJQ2 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp1Q8BJQ2 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Usp1Q8BJQ2 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp1Q8BJQ2 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Usp1Q8BJQ2 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp1Q8BJQ2 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp1Q8BJQ2 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp1Q8BJQ2 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp1Q8BJQ2 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp1Q8BJQ2 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp1Q8BJQ2 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms