Protein–RNA interactions for Protein: Q6PE13

Prrt3, Proline-rich transmembrane protein 3, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt3Q6PE13 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prrt3Q6PE13 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Prrt3Q6PE13 Gm7291-201ENSMUST00000199147 382 ntBASIC20.87■□□□□ 0.93
Prrt3Q6PE13 Gm42642-201ENSMUST00000200683 355 ntBASIC20.87■□□□□ 0.93
Prrt3Q6PE13 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prrt3Q6PE13 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Prrt3Q6PE13 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Prrt3Q6PE13 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prrt3Q6PE13 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prrt3Q6PE13 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prrt3Q6PE13 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
Prrt3Q6PE13 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prrt3Q6PE13 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prrt3Q6PE13 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prrt3Q6PE13 Gm11421-201ENSMUST00000122124 294 ntBASIC20.86■□□□□ 0.93
Prrt3Q6PE13 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Prrt3Q6PE13 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prrt3Q6PE13 Gm42569-201ENSMUST00000200539 472 ntBASIC20.86■□□□□ 0.93
Prrt3Q6PE13 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prrt3Q6PE13 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prrt3Q6PE13 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prrt3Q6PE13 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prrt3Q6PE13 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prrt3Q6PE13 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prrt3Q6PE13 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prrt3Q6PE13 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.85■□□□□ 0.93
Prrt3Q6PE13 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prrt3Q6PE13 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prrt3Q6PE13 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Prrt3Q6PE13 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.85■□□□□ 0.93
Prrt3Q6PE13 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Prrt3Q6PE13 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Prrt3Q6PE13 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Prrt3Q6PE13 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prrt3Q6PE13 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prrt3Q6PE13 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Prrt3Q6PE13 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.84■□□□□ 0.93
Prrt3Q6PE13 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prrt3Q6PE13 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prrt3Q6PE13 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Prrt3Q6PE13 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Prrt3Q6PE13 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Prrt3Q6PE13 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Prrt3Q6PE13 Gm10849-201ENSMUST00000100397 618 ntBASIC20.83■□□□□ 0.93
Prrt3Q6PE13 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Prrt3Q6PE13 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Prrt3Q6PE13 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Prrt3Q6PE13 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Prrt3Q6PE13 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prrt3Q6PE13 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.82■□□□□ 0.92
Prrt3Q6PE13 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Prrt3Q6PE13 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.82■□□□□ 0.92
Prrt3Q6PE13 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prrt3Q6PE13 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prrt3Q6PE13 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Prrt3Q6PE13 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.82■□□□□ 0.92
Prrt3Q6PE13 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Prrt3Q6PE13 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.82■□□□□ 0.92
Prrt3Q6PE13 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.81■□□□□ 0.92
Prrt3Q6PE13 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Prrt3Q6PE13 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prrt3Q6PE13 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prrt3Q6PE13 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
Prrt3Q6PE13 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prrt3Q6PE13 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prrt3Q6PE13 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prrt3Q6PE13 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prrt3Q6PE13 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.8■□□□□ 0.92
Prrt3Q6PE13 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.8■□□□□ 0.92
Prrt3Q6PE13 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Prrt3Q6PE13 Gm27405-201ENSMUST00000184201 112 ntBASIC20.8■□□□□ 0.92
Prrt3Q6PE13 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Prrt3Q6PE13 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.8■□□□□ 0.92
Prrt3Q6PE13 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Prrt3Q6PE13 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Prrt3Q6PE13 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Prrt3Q6PE13 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Prrt3Q6PE13 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.79■□□□□ 0.92
Prrt3Q6PE13 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Prrt3Q6PE13 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Prrt3Q6PE13 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.79■□□□□ 0.92
Prrt3Q6PE13 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Prrt3Q6PE13 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Prrt3Q6PE13 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prrt3Q6PE13 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prrt3Q6PE13 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Prrt3Q6PE13 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prrt3Q6PE13 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prrt3Q6PE13 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prrt3Q6PE13 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prrt3Q6PE13 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prrt3Q6PE13 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prrt3Q6PE13 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Prrt3Q6PE13 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prrt3Q6PE13 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prrt3Q6PE13 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Prrt3Q6PE13 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Prrt3Q6PE13 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Prrt3Q6PE13 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Prrt3Q6PE13 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms