Protein–RNA interactions for Protein: Q3V3Q7

Pacs2, Phosphofurin acidic cluster sorting protein 2, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pacs2Q3V3Q7 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pacs2Q3V3Q7 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
Pacs2Q3V3Q7 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pacs2Q3V3Q7 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pacs2Q3V3Q7 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pacs2Q3V3Q7 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pacs2Q3V3Q7 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pacs2Q3V3Q7 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Pacs2Q3V3Q7 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Pacs2Q3V3Q7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pacs2Q3V3Q7 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pacs2Q3V3Q7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pacs2Q3V3Q7 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pacs2Q3V3Q7 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pacs2Q3V3Q7 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pacs2Q3V3Q7 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pacs2Q3V3Q7 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pacs2Q3V3Q7 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pacs2Q3V3Q7 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pacs2Q3V3Q7 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pacs2Q3V3Q7 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pacs2Q3V3Q7 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pacs2Q3V3Q7 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pacs2Q3V3Q7 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.42■□□□□ 0.7
Pacs2Q3V3Q7 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pacs2Q3V3Q7 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pacs2Q3V3Q7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pacs2Q3V3Q7 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pacs2Q3V3Q7 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pacs2Q3V3Q7 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pacs2Q3V3Q7 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Pacs2Q3V3Q7 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Pacs2Q3V3Q7 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pacs2Q3V3Q7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pacs2Q3V3Q7 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pacs2Q3V3Q7 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Pacs2Q3V3Q7 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.41■□□□□ 0.7
Pacs2Q3V3Q7 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pacs2Q3V3Q7 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pacs2Q3V3Q7 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pacs2Q3V3Q7 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Pacs2Q3V3Q7 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
Pacs2Q3V3Q7 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pacs2Q3V3Q7 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pacs2Q3V3Q7 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pacs2Q3V3Q7 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pacs2Q3V3Q7 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Pacs2Q3V3Q7 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Pacs2Q3V3Q7 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pacs2Q3V3Q7 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.39■□□□□ 0.69
Pacs2Q3V3Q7 Gm12922-201ENSMUST00000120626 809 ntBASIC19.39■□□□□ 0.69
Pacs2Q3V3Q7 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pacs2Q3V3Q7 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pacs2Q3V3Q7 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pacs2Q3V3Q7 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pacs2Q3V3Q7 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Pacs2Q3V3Q7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pacs2Q3V3Q7 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pacs2Q3V3Q7 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pacs2Q3V3Q7 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pacs2Q3V3Q7 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pacs2Q3V3Q7 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Pacs2Q3V3Q7 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pacs2Q3V3Q7 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pacs2Q3V3Q7 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.38■□□□□ 0.69
Pacs2Q3V3Q7 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.38■□□□□ 0.69
Pacs2Q3V3Q7 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pacs2Q3V3Q7 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pacs2Q3V3Q7 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pacs2Q3V3Q7 Gm7143-201ENSMUST00000222811 859 ntBASIC19.38■□□□□ 0.69
Pacs2Q3V3Q7 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pacs2Q3V3Q7 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pacs2Q3V3Q7 Gm9847-201ENSMUST00000052528 599 ntBASIC19.38■□□□□ 0.69
Pacs2Q3V3Q7 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pacs2Q3V3Q7 Gm13241-201ENSMUST00000094493 780 ntBASIC19.38■□□□□ 0.69
Pacs2Q3V3Q7 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pacs2Q3V3Q7 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.37■□□□□ 0.69
Pacs2Q3V3Q7 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pacs2Q3V3Q7 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pacs2Q3V3Q7 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pacs2Q3V3Q7 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pacs2Q3V3Q7 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pacs2Q3V3Q7 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Pacs2Q3V3Q7 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pacs2Q3V3Q7 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pacs2Q3V3Q7 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pacs2Q3V3Q7 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pacs2Q3V3Q7 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pacs2Q3V3Q7 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pacs2Q3V3Q7 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pacs2Q3V3Q7 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pacs2Q3V3Q7 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.36■□□□□ 0.69
Pacs2Q3V3Q7 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pacs2Q3V3Q7 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pacs2Q3V3Q7 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Pacs2Q3V3Q7 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pacs2Q3V3Q7 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pacs2Q3V3Q7 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.35■□□□□ 0.69
Pacs2Q3V3Q7 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.35■□□□□ 0.69
Pacs2Q3V3Q7 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms