Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim43aQ3TL54 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Trim43aQ3TL54 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim43aQ3TL54 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.01■□□□□ 0.95
Trim43aQ3TL54 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim43aQ3TL54 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Trim43aQ3TL54 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim43aQ3TL54 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.01■□□□□ 0.95
Trim43aQ3TL54 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Trim43aQ3TL54 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim43aQ3TL54 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21■□□□□ 0.95
Trim43aQ3TL54 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
Trim43aQ3TL54 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21■□□□□ 0.95
Trim43aQ3TL54 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Trim43aQ3TL54 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim43aQ3TL54 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Trim43aQ3TL54 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim43aQ3TL54 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim43aQ3TL54 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim43aQ3TL54 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim43aQ3TL54 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim43aQ3TL54 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim43aQ3TL54 Gm15820-201ENSMUST00000201566 728 ntBASIC20.99■□□□□ 0.95
Trim43aQ3TL54 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.99■□□□□ 0.95
Trim43aQ3TL54 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim43aQ3TL54 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.99■□□□□ 0.95
Trim43aQ3TL54 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim43aQ3TL54 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim43aQ3TL54 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim43aQ3TL54 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim43aQ3TL54 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Trim43aQ3TL54 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim43aQ3TL54 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim43aQ3TL54 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim43aQ3TL54 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim43aQ3TL54 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Trim43aQ3TL54 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim43aQ3TL54 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Trim43aQ3TL54 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.97■□□□□ 0.95
Trim43aQ3TL54 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim43aQ3TL54 Gm10232-201ENSMUST00000089221 720 ntBASIC20.97■□□□□ 0.95
Trim43aQ3TL54 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim43aQ3TL54 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim43aQ3TL54 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim43aQ3TL54 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.96■□□□□ 0.95
Trim43aQ3TL54 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Trim43aQ3TL54 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim43aQ3TL54 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim43aQ3TL54 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim43aQ3TL54 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim43aQ3TL54 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim43aQ3TL54 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim43aQ3TL54 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim43aQ3TL54 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim43aQ3TL54 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Trim43aQ3TL54 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Trim43aQ3TL54 Gm10399-202ENSMUST00000202768 748 ntBASIC20.95■□□□□ 0.94
Trim43aQ3TL54 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim43aQ3TL54 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim43aQ3TL54 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim43aQ3TL54 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Trim43aQ3TL54 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim43aQ3TL54 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim43aQ3TL54 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim43aQ3TL54 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim43aQ3TL54 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim43aQ3TL54 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim43aQ3TL54 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim43aQ3TL54 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim43aQ3TL54 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.93■□□□□ 0.94
Trim43aQ3TL54 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim43aQ3TL54 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim43aQ3TL54 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim43aQ3TL54 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim43aQ3TL54 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim43aQ3TL54 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Trim43aQ3TL54 Rps24-207ENSMUST00000224568 714 ntBASIC20.92■□□□□ 0.94
Trim43aQ3TL54 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.92■□□□□ 0.94
Trim43aQ3TL54 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim43aQ3TL54 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim43aQ3TL54 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim43aQ3TL54 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim43aQ3TL54 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim43aQ3TL54 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim43aQ3TL54 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim43aQ3TL54 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim43aQ3TL54 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.91■□□□□ 0.94
Trim43aQ3TL54 Gm7143-201ENSMUST00000222811 859 ntBASIC20.91■□□□□ 0.94
Trim43aQ3TL54 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim43aQ3TL54 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim43aQ3TL54 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim43aQ3TL54 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Trim43aQ3TL54 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim43aQ3TL54 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.9■□□□□ 0.94
Trim43aQ3TL54 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim43aQ3TL54 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim43aQ3TL54 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim43aQ3TL54 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Trim43aQ3TL54 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim43aQ3TL54 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms