Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Col10a1Q05306 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col10a1Q05306 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col10a1Q05306 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col10a1Q05306 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.25■□□□□ 0.51
Col10a1Q05306 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col10a1Q05306 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col10a1Q05306 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Col10a1Q05306 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col10a1Q05306 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col10a1Q05306 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col10a1Q05306 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Col10a1Q05306 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col10a1Q05306 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col10a1Q05306 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Col10a1Q05306 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Col10a1Q05306 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Col10a1Q05306 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.24■□□□□ 0.51
Col10a1Q05306 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col10a1Q05306 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Col10a1Q05306 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Col10a1Q05306 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.24■□□□□ 0.51
Col10a1Q05306 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Col10a1Q05306 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col10a1Q05306 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Col10a1Q05306 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Col10a1Q05306 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col10a1Q05306 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col10a1Q05306 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col10a1Q05306 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col10a1Q05306 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Col10a1Q05306 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Col10a1Q05306 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col10a1Q05306 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Col10a1Q05306 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col10a1Q05306 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col10a1Q05306 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.23■□□□□ 0.51
Col10a1Q05306 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col10a1Q05306 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col10a1Q05306 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Col10a1Q05306 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col10a1Q05306 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col10a1Q05306 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col10a1Q05306 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Col10a1Q05306 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.22■□□□□ 0.51
Col10a1Q05306 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.22■□□□□ 0.51
Col10a1Q05306 Gm45417-201ENSMUST00000209533 758 ntBASIC18.22■□□□□ 0.51
Col10a1Q05306 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.22■□□□□ 0.51
Col10a1Q05306 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col10a1Q05306 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Col10a1Q05306 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.22■□□□□ 0.51
Col10a1Q05306 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col10a1Q05306 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col10a1Q05306 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Col10a1Q05306 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col10a1Q05306 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col10a1Q05306 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col10a1Q05306 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Col10a1Q05306 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.21■□□□□ 0.51
Col10a1Q05306 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col10a1Q05306 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col10a1Q05306 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Col10a1Q05306 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Col10a1Q05306 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col10a1Q05306 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col10a1Q05306 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col10a1Q05306 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col10a1Q05306 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Col10a1Q05306 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col10a1Q05306 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col10a1Q05306 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col10a1Q05306 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Col10a1Q05306 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col10a1Q05306 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col10a1Q05306 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.2■□□□□ 0.5
Col10a1Q05306 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Col10a1Q05306 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Col10a1Q05306 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.2■□□□□ 0.5
Col10a1Q05306 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col10a1Q05306 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col10a1Q05306 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col10a1Q05306 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Col10a1Q05306 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.2■□□□□ 0.5
Col10a1Q05306 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col10a1Q05306 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Col10a1Q05306 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col10a1Q05306 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col10a1Q05306 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Col10a1Q05306 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col10a1Q05306 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Col10a1Q05306 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Col10a1Q05306 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col10a1Q05306 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Col10a1Q05306 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col10a1Q05306 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col10a1Q05306 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.18■□□□□ 0.5
Col10a1Q05306 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col10a1Q05306 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col10a1Q05306 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Col10a1Q05306 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 115.8 ms