Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Thumpd3P97770 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Thumpd3P97770 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Thumpd3P97770 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Thumpd3P97770 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Thumpd3P97770 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Thumpd3P97770 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Thumpd3P97770 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Thumpd3P97770 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Thumpd3P97770 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Thumpd3P97770 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Thumpd3P97770 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.09■□□□□ 0.81
Thumpd3P97770 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Thumpd3P97770 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.08■□□□□ 0.81
Thumpd3P97770 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Thumpd3P97770 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Thumpd3P97770 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.08■□□□□ 0.81
Thumpd3P97770 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Thumpd3P97770 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Thumpd3P97770 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Thumpd3P97770 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.07■□□□□ 0.8
Thumpd3P97770 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Thumpd3P97770 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Thumpd3P97770 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Thumpd3P97770 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.07■□□□□ 0.8
Thumpd3P97770 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Thumpd3P97770 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Thumpd3P97770 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.07■□□□□ 0.8
Thumpd3P97770 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Thumpd3P97770 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Thumpd3P97770 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.07■□□□□ 0.8
Thumpd3P97770 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Thumpd3P97770 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Thumpd3P97770 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Thumpd3P97770 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Thumpd3P97770 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Thumpd3P97770 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Thumpd3P97770 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Thumpd3P97770 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Thumpd3P97770 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Thumpd3P97770 Gm9847-201ENSMUST00000052528 599 ntBASIC20.06■□□□□ 0.8
Thumpd3P97770 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Thumpd3P97770 Gm13241-201ENSMUST00000094493 780 ntBASIC20.06■□□□□ 0.8
Thumpd3P97770 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.05■□□□□ 0.8
Thumpd3P97770 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Thumpd3P97770 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Thumpd3P97770 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Thumpd3P97770 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Thumpd3P97770 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Thumpd3P97770 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Thumpd3P97770 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Thumpd3P97770 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Thumpd3P97770 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Thumpd3P97770 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Thumpd3P97770 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Thumpd3P97770 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Thumpd3P97770 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
Thumpd3P97770 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Thumpd3P97770 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Thumpd3P97770 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Thumpd3P97770 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Thumpd3P97770 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Thumpd3P97770 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.03■□□□□ 0.8
Thumpd3P97770 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Thumpd3P97770 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Thumpd3P97770 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Thumpd3P97770 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.03■□□□□ 0.8
Thumpd3P97770 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Thumpd3P97770 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Thumpd3P97770 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Thumpd3P97770 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Thumpd3P97770 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Thumpd3P97770 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.02■□□□□ 0.8
Thumpd3P97770 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Thumpd3P97770 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Thumpd3P97770 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Thumpd3P97770 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.02■□□□□ 0.79
Thumpd3P97770 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Thumpd3P97770 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.02■□□□□ 0.79
Thumpd3P97770 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Thumpd3P97770 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Thumpd3P97770 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.01■□□□□ 0.79
Thumpd3P97770 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Thumpd3P97770 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Thumpd3P97770 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20■□□□□ 0.79
Thumpd3P97770 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Thumpd3P97770 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20■□□□□ 0.79
Thumpd3P97770 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Thumpd3P97770 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Thumpd3P97770 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20■□□□□ 0.79
Thumpd3P97770 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Thumpd3P97770 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Thumpd3P97770 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Thumpd3P97770 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Thumpd3P97770 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Thumpd3P97770 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Thumpd3P97770 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Thumpd3P97770 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.99■□□□□ 0.79
Thumpd3P97770 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Thumpd3P97770 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms