Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CTSDP07339 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTSDP07339 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.46■□□□□ 0.55
CTSDP07339 HSD17B1P1-201ENST00000590052 955 ntBASIC18.46■□□□□ 0.55
CTSDP07339 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTSDP07339 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTSDP07339 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.46■□□□□ 0.55
CTSDP07339 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CTSDP07339 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTSDP07339 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CTSDP07339 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.46■□□□□ 0.55
CTSDP07339 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTSDP07339 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTSDP07339 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTSDP07339 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.45■□□□□ 0.54
CTSDP07339 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.45■□□□□ 0.54
CTSDP07339 FBXW4P1-201ENST00000426721 2239 ntBASIC18.45■□□□□ 0.54
CTSDP07339 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTSDP07339 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CTSDP07339 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CTSDP07339 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTSDP07339 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CTSDP07339 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.45■□□□□ 0.54
CTSDP07339 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTSDP07339 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTSDP07339 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTSDP07339 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.44■□□□□ 0.54
CTSDP07339 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTSDP07339 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.44■□□□□ 0.54
CTSDP07339 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTSDP07339 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CTSDP07339 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTSDP07339 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.44■□□□□ 0.54
CTSDP07339 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTSDP07339 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTSDP07339 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CTSDP07339 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTSDP07339 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTSDP07339 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTSDP07339 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTSDP07339 RNF126P1-201ENST00000567452 1320 ntBASIC18.43■□□□□ 0.54
CTSDP07339 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.42■□□□□ 0.54
CTSDP07339 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CTSDP07339 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CTSDP07339 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CTSDP07339 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CTSDP07339 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.42■□□□□ 0.54
CTSDP07339 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CTSDP07339 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CTSDP07339 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CTSDP07339 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CTSDP07339 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CTSDP07339 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTSDP07339 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CTSDP07339 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CTSDP07339 AC087742.1-201ENST00000575880 1738 ntBASIC18.41■□□□□ 0.54
CTSDP07339 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CTSDP07339 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CTSDP07339 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CTSDP07339 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.41■□□□□ 0.54
CTSDP07339 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CTSDP07339 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.41■□□□□ 0.54
CTSDP07339 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.41■□□□□ 0.54
CTSDP07339 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.4■□□□□ 0.54
CTSDP07339 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTSDP07339 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.4■□□□□ 0.54
CTSDP07339 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTSDP07339 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTSDP07339 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CTSDP07339 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.4■□□□□ 0.54
CTSDP07339 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CTSDP07339 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTSDP07339 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTSDP07339 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.4■□□□□ 0.54
CTSDP07339 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTSDP07339 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.4■□□□□ 0.54
CTSDP07339 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CTSDP07339 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTSDP07339 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CTSDP07339 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.4■□□□□ 0.54
CTSDP07339 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CTSDP07339 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
CTSDP07339 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.39■□□□□ 0.53
CTSDP07339 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.39■□□□□ 0.53
CTSDP07339 DUX4L9-201ENST00000449051 1259 ntBASIC18.39■□□□□ 0.53
CTSDP07339 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.39■□□□□ 0.53
CTSDP07339 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTSDP07339 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.39■□□□□ 0.53
CTSDP07339 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTSDP07339 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.39■□□□□ 0.53
CTSDP07339 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTSDP07339 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.39■□□□□ 0.53
CTSDP07339 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CTSDP07339 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.39■□□□□ 0.53
CTSDP07339 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTSDP07339 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTSDP07339 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.38■□□□□ 0.53
CTSDP07339 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTSDP07339 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTSDP07339 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 209.3 ms