Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTNSO60931 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CTNSO60931 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.88■□□□□ 0.93
CTNSO60931 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTNSO60931 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTNSO60931 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CTNSO60931 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.88■□□□□ 0.93
CTNSO60931 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.87■□□□□ 0.93
CTNSO60931 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CTNSO60931 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.87■□□□□ 0.93
CTNSO60931 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTNSO60931 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTNSO60931 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.87■□□□□ 0.93
CTNSO60931 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTNSO60931 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CTNSO60931 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.87■□□□□ 0.93
CTNSO60931 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTNSO60931 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTNSO60931 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.87■□□□□ 0.93
CTNSO60931 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CTNSO60931 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTNSO60931 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.86■□□□□ 0.93
CTNSO60931 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTNSO60931 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTNSO60931 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.86■□□□□ 0.93
CTNSO60931 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTNSO60931 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.86■□□□□ 0.93
CTNSO60931 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTNSO60931 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTNSO60931 AL136162.1-201ENST00000607711 1078 ntBASIC20.86■□□□□ 0.93
CTNSO60931 AC011298.3-201ENST00000615796 283 ntBASIC20.86■□□□□ 0.93
CTNSO60931 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.86■□□□□ 0.93
CTNSO60931 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTNSO60931 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTNSO60931 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.86■□□□□ 0.93
CTNSO60931 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTNSO60931 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTNSO60931 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTNSO60931 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
CTNSO60931 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CTNSO60931 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTNSO60931 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.85■□□□□ 0.93
CTNSO60931 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CTNSO60931 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CTNSO60931 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.85■□□□□ 0.93
CTNSO60931 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTNSO60931 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTNSO60931 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTNSO60931 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.85■□□□□ 0.93
CTNSO60931 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.84■□□□□ 0.93
CTNSO60931 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTNSO60931 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.84■□□□□ 0.93
CTNSO60931 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTNSO60931 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.84■□□□□ 0.93
CTNSO60931 AL139246.5-201ENST00000606645 996 ntBASIC20.84■□□□□ 0.93
CTNSO60931 AC110285.6-201ENST00000617652 491 ntBASIC20.84■□□□□ 0.93
CTNSO60931 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.84■□□□□ 0.93
CTNSO60931 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CTNSO60931 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTNSO60931 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTNSO60931 AC133637.1-201ENST00000624115 1537 ntBASIC20.83■□□□□ 0.93
CTNSO60931 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CTNSO60931 PBX2P1-201ENST00000493219 1291 ntBASIC20.83■□□□□ 0.93
CTNSO60931 AC024257.2-201ENST00000549699 147 ntBASIC20.83■□□□□ 0.93
CTNSO60931 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.83■□□□□ 0.93
CTNSO60931 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CTNSO60931 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.83■□□□□ 0.92
CTNSO60931 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CTNSO60931 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CTNSO60931 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.83■□□□□ 0.92
CTNSO60931 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CTNSO60931 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTNSO60931 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CTNSO60931 AC135279.3-201ENST00000610945 1311 ntBASIC20.82■□□□□ 0.92
CTNSO60931 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
CTNSO60931 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.82■□□□□ 0.92
CTNSO60931 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.82■□□□□ 0.92
CTNSO60931 AC106739.1-201ENST00000617035 715 ntBASIC20.82■□□□□ 0.92
CTNSO60931 AC136469.2-201ENST00000623944 1028 ntBASIC20.82■□□□□ 0.92
CTNSO60931 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTNSO60931 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
CTNSO60931 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTNSO60931 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTNSO60931 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTNSO60931 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CTNSO60931 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CTNSO60931 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTNSO60931 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CTNSO60931 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CTNSO60931 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CTNSO60931 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.81■□□□□ 0.92
CTNSO60931 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.81■□□□□ 0.92
CTNSO60931 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.81■□□□□ 0.92
CTNSO60931 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CTNSO60931 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CTNSO60931 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTNSO60931 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CTNSO60931 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.8■□□□□ 0.92
CTNSO60931 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.8■□□□□ 0.92
CTNSO60931 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms