Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hps1O08983 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hps1O08983 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hps1O08983 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hps1O08983 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hps1O08983 Gm22238-201ENSMUST00000175222 88 ntBASIC18.21■□□□□ 0.51
Hps1O08983 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.21■□□□□ 0.51
Hps1O08983 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hps1O08983 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hps1O08983 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hps1O08983 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hps1O08983 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Hps1O08983 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hps1O08983 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hps1O08983 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Hps1O08983 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hps1O08983 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Hps1O08983 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hps1O08983 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Hps1O08983 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hps1O08983 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hps1O08983 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.2■□□□□ 0.5
Hps1O08983 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.2■□□□□ 0.5
Hps1O08983 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.2■□□□□ 0.5
Hps1O08983 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hps1O08983 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hps1O08983 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hps1O08983 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hps1O08983 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hps1O08983 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hps1O08983 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hps1O08983 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hps1O08983 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.19■□□□□ 0.5
Hps1O08983 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Hps1O08983 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hps1O08983 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hps1O08983 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.19■□□□□ 0.5
Hps1O08983 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.19■□□□□ 0.5
Hps1O08983 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hps1O08983 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hps1O08983 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Hps1O08983 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hps1O08983 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hps1O08983 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hps1O08983 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hps1O08983 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Hps1O08983 Gm12821-201ENSMUST00000120022 600 ntBASIC18.18■□□□□ 0.5
Hps1O08983 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hps1O08983 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.18■□□□□ 0.5
Hps1O08983 Gm40881-201ENSMUST00000223397 166 ntBASIC18.18■□□□□ 0.5
Hps1O08983 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hps1O08983 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Hps1O08983 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hps1O08983 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hps1O08983 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hps1O08983 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hps1O08983 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.18■□□□□ 0.5
Hps1O08983 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Hps1O08983 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hps1O08983 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Hps1O08983 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hps1O08983 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hps1O08983 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hps1O08983 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Hps1O08983 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hps1O08983 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hps1O08983 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Hps1O08983 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hps1O08983 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hps1O08983 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hps1O08983 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hps1O08983 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hps1O08983 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hps1O08983 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hps1O08983 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hps1O08983 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hps1O08983 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hps1O08983 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hps1O08983 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hps1O08983 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hps1O08983 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Hps1O08983 Gm21956-201ENSMUST00000179946 522 ntBASIC18.15■□□□□ 0.5
Hps1O08983 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hps1O08983 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hps1O08983 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hps1O08983 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.15■□□□□ 0.5
Hps1O08983 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hps1O08983 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hps1O08983 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Hps1O08983 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.15■□□□□ 0.5
Hps1O08983 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hps1O08983 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hps1O08983 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hps1O08983 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Hps1O08983 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Hps1O08983 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Hps1O08983 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hps1O08983 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.14■□□□□ 0.49
Hps1O08983 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.14■□□□□ 0.49
Hps1O08983 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms