Protein–RNA interactions for Protein: F6XS56

Gm8444, Predicted gene 8444, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm8444F6XS56 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Gm8444F6XS56 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm8444F6XS56 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gm8444F6XS56 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm8444F6XS56 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm8444F6XS56 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.4■□□□□ 0.7
Gm8444F6XS56 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm8444F6XS56 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm8444F6XS56 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm8444F6XS56 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.4■□□□□ 0.7
Gm8444F6XS56 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Gm8444F6XS56 Gm22238-201ENSMUST00000175222 88 ntBASIC19.4■□□□□ 0.7
Gm8444F6XS56 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm8444F6XS56 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gm8444F6XS56 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm8444F6XS56 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm8444F6XS56 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm8444F6XS56 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm8444F6XS56 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.39■□□□□ 0.69
Gm8444F6XS56 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.39■□□□□ 0.69
Gm8444F6XS56 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
Gm8444F6XS56 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm8444F6XS56 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm8444F6XS56 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm8444F6XS56 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm8444F6XS56 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm8444F6XS56 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm8444F6XS56 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Gm8444F6XS56 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.38■□□□□ 0.69
Gm8444F6XS56 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm8444F6XS56 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Gm8444F6XS56 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Gm8444F6XS56 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm8444F6XS56 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm8444F6XS56 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm8444F6XS56 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm8444F6XS56 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm8444F6XS56 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.37■□□□□ 0.69
Gm8444F6XS56 Gm9870-201ENSMUST00000063874 645 ntBASIC19.37■□□□□ 0.69
Gm8444F6XS56 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm8444F6XS56 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm8444F6XS56 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Gm8444F6XS56 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm8444F6XS56 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.36■□□□□ 0.69
Gm8444F6XS56 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.36■□□□□ 0.69
Gm8444F6XS56 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.36■□□□□ 0.69
Gm8444F6XS56 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm8444F6XS56 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gm8444F6XS56 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm8444F6XS56 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm8444F6XS56 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Gm8444F6XS56 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm8444F6XS56 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Gm8444F6XS56 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm8444F6XS56 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm8444F6XS56 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.35■□□□□ 0.69
Gm8444F6XS56 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gm8444F6XS56 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.35■□□□□ 0.69
Gm8444F6XS56 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm8444F6XS56 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gm8444F6XS56 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm8444F6XS56 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm8444F6XS56 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm8444F6XS56 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm8444F6XS56 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.34■□□□□ 0.69
Gm8444F6XS56 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm8444F6XS56 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
Gm8444F6XS56 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Gm8444F6XS56 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm8444F6XS56 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm8444F6XS56 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gm8444F6XS56 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gm8444F6XS56 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gm8444F6XS56 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Gm8444F6XS56 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm8444F6XS56 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Gm8444F6XS56 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm8444F6XS56 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm8444F6XS56 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Gm8444F6XS56 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.33■□□□□ 0.68
Gm8444F6XS56 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.33■□□□□ 0.68
Gm8444F6XS56 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm8444F6XS56 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm8444F6XS56 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm8444F6XS56 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm8444F6XS56 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm8444F6XS56 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.32■□□□□ 0.68
Gm8444F6XS56 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.32■□□□□ 0.68
Gm8444F6XS56 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Gm8444F6XS56 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gm8444F6XS56 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm8444F6XS56 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm8444F6XS56 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gm8444F6XS56 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm8444F6XS56 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Gm8444F6XS56 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.31■□□□□ 0.68
Gm8444F6XS56 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm8444F6XS56 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm8444F6XS56 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm8444F6XS56 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms