Protein–RNA interactions for Protein: Q9WUP1

Ramp3, Receptor activity-modifying protein 3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ramp3Q9WUP1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ramp3Q9WUP1 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.81■□□□□ 0.44
Ramp3Q9WUP1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ramp3Q9WUP1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.81■□□□□ 0.44
Ramp3Q9WUP1 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ramp3Q9WUP1 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ramp3Q9WUP1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ramp3Q9WUP1 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ramp3Q9WUP1 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ramp3Q9WUP1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.8■□□□□ 0.44
Ramp3Q9WUP1 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ramp3Q9WUP1 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ramp3Q9WUP1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ramp3Q9WUP1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ramp3Q9WUP1 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Ramp3Q9WUP1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ramp3Q9WUP1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ramp3Q9WUP1 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Ramp3Q9WUP1 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ramp3Q9WUP1 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Ramp3Q9WUP1 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ramp3Q9WUP1 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ramp3Q9WUP1 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.79■□□□□ 0.44
Ramp3Q9WUP1 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ramp3Q9WUP1 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ramp3Q9WUP1 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.79■□□□□ 0.44
Ramp3Q9WUP1 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ramp3Q9WUP1 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ramp3Q9WUP1 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ramp3Q9WUP1 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ramp3Q9WUP1 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Ramp3Q9WUP1 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.78■□□□□ 0.44
Ramp3Q9WUP1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ramp3Q9WUP1 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ramp3Q9WUP1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
Ramp3Q9WUP1 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.78■□□□□ 0.44
Ramp3Q9WUP1 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.78■□□□□ 0.44
Ramp3Q9WUP1 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.78■□□□□ 0.44
Ramp3Q9WUP1 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ramp3Q9WUP1 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ramp3Q9WUP1 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ramp3Q9WUP1 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ramp3Q9WUP1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Ramp3Q9WUP1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ramp3Q9WUP1 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ramp3Q9WUP1 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
Ramp3Q9WUP1 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.77■□□□□ 0.43
Ramp3Q9WUP1 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Ramp3Q9WUP1 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ramp3Q9WUP1 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ramp3Q9WUP1 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ramp3Q9WUP1 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.76■□□□□ 0.43
Ramp3Q9WUP1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.76■□□□□ 0.43
Ramp3Q9WUP1 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ramp3Q9WUP1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ramp3Q9WUP1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Ramp3Q9WUP1 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ramp3Q9WUP1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ramp3Q9WUP1 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ramp3Q9WUP1 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ramp3Q9WUP1 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.75■□□□□ 0.43
Ramp3Q9WUP1 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ramp3Q9WUP1 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ramp3Q9WUP1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ramp3Q9WUP1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
Ramp3Q9WUP1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Ramp3Q9WUP1 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ramp3Q9WUP1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ramp3Q9WUP1 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Ramp3Q9WUP1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Ramp3Q9WUP1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.74■□□□□ 0.43
Ramp3Q9WUP1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ramp3Q9WUP1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Ramp3Q9WUP1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ramp3Q9WUP1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ramp3Q9WUP1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Ramp3Q9WUP1 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ramp3Q9WUP1 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ramp3Q9WUP1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ramp3Q9WUP1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ramp3Q9WUP1 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ramp3Q9WUP1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.73■□□□□ 0.43
Ramp3Q9WUP1 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ramp3Q9WUP1 Gm42642-201ENSMUST00000200683 355 ntBASIC17.73■□□□□ 0.43
Ramp3Q9WUP1 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.73■□□□□ 0.43
Ramp3Q9WUP1 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ramp3Q9WUP1 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ramp3Q9WUP1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ramp3Q9WUP1 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Ramp3Q9WUP1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ramp3Q9WUP1 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
Ramp3Q9WUP1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Ramp3Q9WUP1 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ramp3Q9WUP1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ramp3Q9WUP1 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ramp3Q9WUP1 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ramp3Q9WUP1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ramp3Q9WUP1 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.72■□□□□ 0.43
Ramp3Q9WUP1 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ramp3Q9WUP1 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms