Protein–RNA interactions for Protein: Q9R0W9

Chrna6, Neuronal acetylcholine receptor subunit alpha-6, mousemouse

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna6Q9R0W9 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chrna6Q9R0W9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Chrna6Q9R0W9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chrna6Q9R0W9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chrna6Q9R0W9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Chrna6Q9R0W9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chrna6Q9R0W9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chrna6Q9R0W9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.24■□□□□ 0.83
Chrna6Q9R0W9 Gm6139-201ENSMUST00000079261 882 ntBASIC20.24■□□□□ 0.83
Chrna6Q9R0W9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chrna6Q9R0W9 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Chrna6Q9R0W9 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Chrna6Q9R0W9 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Chrna6Q9R0W9 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chrna6Q9R0W9 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chrna6Q9R0W9 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.23■□□□□ 0.83
Chrna6Q9R0W9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chrna6Q9R0W9 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chrna6Q9R0W9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chrna6Q9R0W9 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chrna6Q9R0W9 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.22■□□□□ 0.83
Chrna6Q9R0W9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chrna6Q9R0W9 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chrna6Q9R0W9 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chrna6Q9R0W9 Gm8493-201ENSMUST00000196881 489 ntBASIC20.22■□□□□ 0.83
Chrna6Q9R0W9 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.22■□□□□ 0.83
Chrna6Q9R0W9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chrna6Q9R0W9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chrna6Q9R0W9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.22■□□□□ 0.83
Chrna6Q9R0W9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chrna6Q9R0W9 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chrna6Q9R0W9 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chrna6Q9R0W9 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chrna6Q9R0W9 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chrna6Q9R0W9 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.21■□□□□ 0.83
Chrna6Q9R0W9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chrna6Q9R0W9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chrna6Q9R0W9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.21■□□□□ 0.83
Chrna6Q9R0W9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
Chrna6Q9R0W9 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.83
Chrna6Q9R0W9 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chrna6Q9R0W9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.2■□□□□ 0.82
Chrna6Q9R0W9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.2■□□□□ 0.82
Chrna6Q9R0W9 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chrna6Q9R0W9 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Chrna6Q9R0W9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.2■□□□□ 0.82
Chrna6Q9R0W9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chrna6Q9R0W9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.2■□□□□ 0.82
Chrna6Q9R0W9 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chrna6Q9R0W9 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.2■□□□□ 0.82
Chrna6Q9R0W9 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chrna6Q9R0W9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chrna6Q9R0W9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.19■□□□□ 0.82
Chrna6Q9R0W9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chrna6Q9R0W9 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.19■□□□□ 0.82
Chrna6Q9R0W9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chrna6Q9R0W9 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Chrna6Q9R0W9 Gm43173-201ENSMUST00000202246 593 ntBASIC20.19■□□□□ 0.82
Chrna6Q9R0W9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Chrna6Q9R0W9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chrna6Q9R0W9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chrna6Q9R0W9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Chrna6Q9R0W9 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chrna6Q9R0W9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chrna6Q9R0W9 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.18■□□□□ 0.82
Chrna6Q9R0W9 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Chrna6Q9R0W9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Chrna6Q9R0W9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chrna6Q9R0W9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Chrna6Q9R0W9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chrna6Q9R0W9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chrna6Q9R0W9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.18■□□□□ 0.82
Chrna6Q9R0W9 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Chrna6Q9R0W9 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.18■□□□□ 0.82
Chrna6Q9R0W9 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Chrna6Q9R0W9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chrna6Q9R0W9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.18■□□□□ 0.82
Chrna6Q9R0W9 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Chrna6Q9R0W9 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chrna6Q9R0W9 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chrna6Q9R0W9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.17■□□□□ 0.82
Chrna6Q9R0W9 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chrna6Q9R0W9 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Chrna6Q9R0W9 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chrna6Q9R0W9 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Chrna6Q9R0W9 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Chrna6Q9R0W9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Chrna6Q9R0W9 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.17■□□□□ 0.82
Chrna6Q9R0W9 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Chrna6Q9R0W9 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Chrna6Q9R0W9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.16■□□□□ 0.82
Chrna6Q9R0W9 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.16■□□□□ 0.82
Chrna6Q9R0W9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chrna6Q9R0W9 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chrna6Q9R0W9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chrna6Q9R0W9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Chrna6Q9R0W9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chrna6Q9R0W9 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chrna6Q9R0W9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Chrna6Q9R0W9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms