Protein–RNA interactions for Protein: Q9NP91

SLC6A20, Sodium- and chloride-dependent transporter XTRP3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20Q9NP91 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.46■■□□□ 1.03
SLC6A20Q9NP91 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.46■■□□□ 1.03
SLC6A20Q9NP91 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.46■■□□□ 1.03
SLC6A20Q9NP91 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC6A20Q9NP91 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.46■■□□□ 1.03
SLC6A20Q9NP91 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SLC6A20Q9NP91 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC6A20Q9NP91 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC6A20Q9NP91 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC6A20Q9NP91 SERBP1P1-201ENST00000396021 1160 ntBASIC21.45■■□□□ 1.02
SLC6A20Q9NP91 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC6A20Q9NP91 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.45■■□□□ 1.02
SLC6A20Q9NP91 AC092171.4-201ENST00000609130 632 ntBASIC21.45■■□□□ 1.02
SLC6A20Q9NP91 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC6A20Q9NP91 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
SLC6A20Q9NP91 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC6A20Q9NP91 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.45■■□□□ 1.02
SLC6A20Q9NP91 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.02
SLC6A20Q9NP91 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC6A20Q9NP91 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC6A20Q9NP91 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SLC6A20Q9NP91 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC6A20Q9NP91 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC6A20Q9NP91 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.44■■□□□ 1.02
SLC6A20Q9NP91 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
SLC6A20Q9NP91 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC6A20Q9NP91 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.44■■□□□ 1.02
SLC6A20Q9NP91 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC6A20Q9NP91 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC6A20Q9NP91 UNC93B3-201ENST00000308076 687 ntBASIC21.44■■□□□ 1.02
SLC6A20Q9NP91 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.44■■□□□ 1.02
SLC6A20Q9NP91 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.44■■□□□ 1.02
SLC6A20Q9NP91 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.44■■□□□ 1.02
SLC6A20Q9NP91 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC6A20Q9NP91 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.44■■□□□ 1.02
SLC6A20Q9NP91 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC6A20Q9NP91 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.44■■□□□ 1.02
SLC6A20Q9NP91 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC6A20Q9NP91 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC6A20Q9NP91 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
SLC6A20Q9NP91 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.44■■□□□ 1.02
SLC6A20Q9NP91 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC6A20Q9NP91 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC6A20Q9NP91 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.43■■□□□ 1.02
SLC6A20Q9NP91 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC6A20Q9NP91 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC6A20Q9NP91 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC6A20Q9NP91 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SLC6A20Q9NP91 MIR3181-201ENST00000578512 73 ntBASIC21.43■■□□□ 1.02
SLC6A20Q9NP91 pRNA.6-201ENST00000610482 90 ntBASIC21.43■■□□□ 1.02
SLC6A20Q9NP91 pRNA.5-201ENST00000612139 90 ntBASIC21.43■■□□□ 1.02
SLC6A20Q9NP91 pRNA.11-201ENST00000618423 90 ntBASIC21.43■■□□□ 1.02
SLC6A20Q9NP91 pRNA.13-201ENST00000619112 90 ntBASIC21.43■■□□□ 1.02
SLC6A20Q9NP91 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC6A20Q9NP91 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC6A20Q9NP91 SYT6-210ENST00000641643 1587 ntBASIC21.43■■□□□ 1.02
SLC6A20Q9NP91 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.43■■□□□ 1.02
SLC6A20Q9NP91 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.43■■□□□ 1.02
SLC6A20Q9NP91 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.43■■□□□ 1.02
SLC6A20Q9NP91 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SLC6A20Q9NP91 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SLC6A20Q9NP91 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
SLC6A20Q9NP91 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.42■■□□□ 1.02
SLC6A20Q9NP91 MIR935-201ENST00000401179 91 ntBASIC21.42■■□□□ 1.02
SLC6A20Q9NP91 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SLC6A20Q9NP91 DUX4L19-201ENST00000557448 1267 ntBASIC21.42■■□□□ 1.02
SLC6A20Q9NP91 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.42■■□□□ 1.02
SLC6A20Q9NP91 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
SLC6A20Q9NP91 DUSP8P3-201ENST00000399571 1760 ntBASIC21.41■■□□□ 1.02
SLC6A20Q9NP91 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.41■■□□□ 1.02
SLC6A20Q9NP91 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.41■■□□□ 1.02
SLC6A20Q9NP91 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SLC6A20Q9NP91 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC6A20Q9NP91 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.41■■□□□ 1.02
SLC6A20Q9NP91 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC6A20Q9NP91 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.41■■□□□ 1.02
SLC6A20Q9NP91 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
SLC6A20Q9NP91 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC6A20Q9NP91 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.41■■□□□ 1.02
SLC6A20Q9NP91 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
SLC6A20Q9NP91 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SLC6A20Q9NP91 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
SLC6A20Q9NP91 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.4■■□□□ 1.02
SLC6A20Q9NP91 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.4■■□□□ 1.02
SLC6A20Q9NP91 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SLC6A20Q9NP91 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SLC6A20Q9NP91 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SLC6A20Q9NP91 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SLC6A20Q9NP91 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.4■■□□□ 1.02
SLC6A20Q9NP91 AL136162.1-201ENST00000607711 1078 ntBASIC21.4■■□□□ 1.02
SLC6A20Q9NP91 AC005837.3-201ENST00000612163 286 ntBASIC21.4■■□□□ 1.02
SLC6A20Q9NP91 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.4■■□□□ 1.02
SLC6A20Q9NP91 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.4■■□□□ 1.02
SLC6A20Q9NP91 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SLC6A20Q9NP91 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.4■■□□□ 1.02
SLC6A20Q9NP91 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SLC6A20Q9NP91 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.4■■□□□ 1.02
SLC6A20Q9NP91 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SLC6A20Q9NP91 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SLC6A20Q9NP91 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.39■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms