Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Hmg20aQ9DC33 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.14■□□□□ 0.49
Hmg20aQ9DC33 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmg20aQ9DC33 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmg20aQ9DC33 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmg20aQ9DC33 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Hmg20aQ9DC33 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmg20aQ9DC33 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.13■□□□□ 0.49
Hmg20aQ9DC33 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hmg20aQ9DC33 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hmg20aQ9DC33 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hmg20aQ9DC33 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.13■□□□□ 0.49
Hmg20aQ9DC33 Gm44428-201ENSMUST00000204474 874 ntBASIC18.13■□□□□ 0.49
Hmg20aQ9DC33 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hmg20aQ9DC33 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hmg20aQ9DC33 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hmg20aQ9DC33 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hmg20aQ9DC33 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hmg20aQ9DC33 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hmg20aQ9DC33 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hmg20aQ9DC33 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.12■□□□□ 0.49
Hmg20aQ9DC33 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.12■□□□□ 0.49
Hmg20aQ9DC33 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Hmg20aQ9DC33 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hmg20aQ9DC33 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hmg20aQ9DC33 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.12■□□□□ 0.49
Hmg20aQ9DC33 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hmg20aQ9DC33 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Hmg20aQ9DC33 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hmg20aQ9DC33 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hmg20aQ9DC33 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hmg20aQ9DC33 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Hmg20aQ9DC33 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmg20aQ9DC33 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmg20aQ9DC33 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmg20aQ9DC33 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmg20aQ9DC33 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Hmg20aQ9DC33 Scarna2-201ENSMUST00000157560 414 ntBASIC18.11■□□□□ 0.49
Hmg20aQ9DC33 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Hmg20aQ9DC33 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Hmg20aQ9DC33 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Hmg20aQ9DC33 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmg20aQ9DC33 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.11■□□□□ 0.49
Hmg20aQ9DC33 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmg20aQ9DC33 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Hmg20aQ9DC33 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hmg20aQ9DC33 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hmg20aQ9DC33 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hmg20aQ9DC33 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Hmg20aQ9DC33 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.1■□□□□ 0.49
Hmg20aQ9DC33 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hmg20aQ9DC33 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hmg20aQ9DC33 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hmg20aQ9DC33 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hmg20aQ9DC33 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hmg20aQ9DC33 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hmg20aQ9DC33 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hmg20aQ9DC33 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hmg20aQ9DC33 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hmg20aQ9DC33 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hmg20aQ9DC33 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hmg20aQ9DC33 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hmg20aQ9DC33 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.09■□□□□ 0.49
Hmg20aQ9DC33 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hmg20aQ9DC33 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hmg20aQ9DC33 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hmg20aQ9DC33 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hmg20aQ9DC33 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hmg20aQ9DC33 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.08■□□□□ 0.48
Hmg20aQ9DC33 Gm16437-201ENSMUST00000025669 507 ntBASIC18.08■□□□□ 0.48
Hmg20aQ9DC33 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hmg20aQ9DC33 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Hmg20aQ9DC33 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.08■□□□□ 0.48
Hmg20aQ9DC33 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hmg20aQ9DC33 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hmg20aQ9DC33 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hmg20aQ9DC33 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hmg20aQ9DC33 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hmg20aQ9DC33 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hmg20aQ9DC33 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Hmg20aQ9DC33 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Hmg20aQ9DC33 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.07■□□□□ 0.48
Hmg20aQ9DC33 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hmg20aQ9DC33 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hmg20aQ9DC33 Gm9806-201ENSMUST00000051080 552 ntBASIC18.07■□□□□ 0.48
Hmg20aQ9DC33 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hmg20aQ9DC33 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Hmg20aQ9DC33 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Hmg20aQ9DC33 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hmg20aQ9DC33 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Hmg20aQ9DC33 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Hmg20aQ9DC33 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hmg20aQ9DC33 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hmg20aQ9DC33 Rarb-207ENSMUST00000225921 2756 ntBASIC18.06■□□□□ 0.48
Hmg20aQ9DC33 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hmg20aQ9DC33 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.06■□□□□ 0.48
Hmg20aQ9DC33 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hmg20aQ9DC33 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hmg20aQ9DC33 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hmg20aQ9DC33 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 135.1 ms