Protein–RNA interactions for Protein: Q9D287

Bcas2, Pre-mRNA-splicing factor SPF27, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bcas2Q9D287 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Bcas2Q9D287 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Bcas2Q9D287 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Bcas2Q9D287 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Bcas2Q9D287 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Bcas2Q9D287 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Bcas2Q9D287 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.26■□□□□ 0.67
Bcas2Q9D287 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.25■□□□□ 0.67
Bcas2Q9D287 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Bcas2Q9D287 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Bcas2Q9D287 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Bcas2Q9D287 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Bcas2Q9D287 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Bcas2Q9D287 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Bcas2Q9D287 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Bcas2Q9D287 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Bcas2Q9D287 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Bcas2Q9D287 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Bcas2Q9D287 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Bcas2Q9D287 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.24■□□□□ 0.67
Bcas2Q9D287 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Bcas2Q9D287 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Bcas2Q9D287 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.23■□□□□ 0.67
Bcas2Q9D287 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Bcas2Q9D287 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Bcas2Q9D287 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Bcas2Q9D287 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Bcas2Q9D287 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Bcas2Q9D287 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.22■□□□□ 0.67
Bcas2Q9D287 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Bcas2Q9D287 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Bcas2Q9D287 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Bcas2Q9D287 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Bcas2Q9D287 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Bcas2Q9D287 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.22■□□□□ 0.67
Bcas2Q9D287 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.22■□□□□ 0.67
Bcas2Q9D287 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Bcas2Q9D287 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Bcas2Q9D287 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Bcas2Q9D287 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.22■□□□□ 0.67
Bcas2Q9D287 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Bcas2Q9D287 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Bcas2Q9D287 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Bcas2Q9D287 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Bcas2Q9D287 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Bcas2Q9D287 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Bcas2Q9D287 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Bcas2Q9D287 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Bcas2Q9D287 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Bcas2Q9D287 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Bcas2Q9D287 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.21■□□□□ 0.67
Bcas2Q9D287 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Bcas2Q9D287 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Bcas2Q9D287 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Bcas2Q9D287 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Bcas2Q9D287 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Bcas2Q9D287 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Bcas2Q9D287 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Bcas2Q9D287 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Bcas2Q9D287 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Bcas2Q9D287 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Bcas2Q9D287 Gm7417-201ENSMUST00000192950 473 ntBASIC19.19■□□□□ 0.66
Bcas2Q9D287 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.19■□□□□ 0.66
Bcas2Q9D287 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Bcas2Q9D287 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Bcas2Q9D287 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Bcas2Q9D287 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Bcas2Q9D287 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Bcas2Q9D287 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Bcas2Q9D287 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Bcas2Q9D287 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Bcas2Q9D287 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Bcas2Q9D287 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.18■□□□□ 0.66
Bcas2Q9D287 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Bcas2Q9D287 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Bcas2Q9D287 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.18■□□□□ 0.66
Bcas2Q9D287 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.18■□□□□ 0.66
Bcas2Q9D287 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Bcas2Q9D287 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Bcas2Q9D287 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Bcas2Q9D287 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Bcas2Q9D287 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Bcas2Q9D287 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Bcas2Q9D287 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Bcas2Q9D287 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Bcas2Q9D287 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Bcas2Q9D287 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Bcas2Q9D287 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Bcas2Q9D287 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Bcas2Q9D287 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Bcas2Q9D287 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Bcas2Q9D287 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Bcas2Q9D287 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Bcas2Q9D287 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.16■□□□□ 0.66
Bcas2Q9D287 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Bcas2Q9D287 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.16■□□□□ 0.66
Bcas2Q9D287 Etf1-202ENSMUST00000180351 108 ntBASIC19.16■□□□□ 0.66
Bcas2Q9D287 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Bcas2Q9D287 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Bcas2Q9D287 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms