Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
YIPF4Q9BSR8 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.94■□□□□ 0.94
YIPF4Q9BSR8 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
YIPF4Q9BSR8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
YIPF4Q9BSR8 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.94■□□□□ 0.94
YIPF4Q9BSR8 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
YIPF4Q9BSR8 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
YIPF4Q9BSR8 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
YIPF4Q9BSR8 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
YIPF4Q9BSR8 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
YIPF4Q9BSR8 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
YIPF4Q9BSR8 AC010997.5-201ENST00000609182 354 ntBASIC20.93■□□□□ 0.94
YIPF4Q9BSR8 AL353803.4-201ENST00000565882 1934 ntBASIC20.93■□□□□ 0.94
YIPF4Q9BSR8 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
YIPF4Q9BSR8 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
YIPF4Q9BSR8 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
YIPF4Q9BSR8 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
YIPF4Q9BSR8 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
YIPF4Q9BSR8 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
YIPF4Q9BSR8 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
YIPF4Q9BSR8 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
YIPF4Q9BSR8 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
YIPF4Q9BSR8 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
YIPF4Q9BSR8 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
YIPF4Q9BSR8 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
YIPF4Q9BSR8 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
YIPF4Q9BSR8 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
YIPF4Q9BSR8 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
YIPF4Q9BSR8 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.92■□□□□ 0.94
YIPF4Q9BSR8 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.92■□□□□ 0.94
YIPF4Q9BSR8 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.92■□□□□ 0.94
YIPF4Q9BSR8 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.92■□□□□ 0.94
YIPF4Q9BSR8 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
YIPF4Q9BSR8 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
YIPF4Q9BSR8 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
YIPF4Q9BSR8 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
YIPF4Q9BSR8 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
YIPF4Q9BSR8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
YIPF4Q9BSR8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
YIPF4Q9BSR8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
YIPF4Q9BSR8 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
YIPF4Q9BSR8 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.91■□□□□ 0.94
YIPF4Q9BSR8 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.91■□□□□ 0.94
YIPF4Q9BSR8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
YIPF4Q9BSR8 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.9■□□□□ 0.94
YIPF4Q9BSR8 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
YIPF4Q9BSR8 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
YIPF4Q9BSR8 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.9■□□□□ 0.94
YIPF4Q9BSR8 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.9■□□□□ 0.94
YIPF4Q9BSR8 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
YIPF4Q9BSR8 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
YIPF4Q9BSR8 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
YIPF4Q9BSR8 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
YIPF4Q9BSR8 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
YIPF4Q9BSR8 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
YIPF4Q9BSR8 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
YIPF4Q9BSR8 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
YIPF4Q9BSR8 UNC93B8-201ENST00000511903 705 ntBASIC20.89■□□□□ 0.93
YIPF4Q9BSR8 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.89■□□□□ 0.93
YIPF4Q9BSR8 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.89■□□□□ 0.93
YIPF4Q9BSR8 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.89■□□□□ 0.93
YIPF4Q9BSR8 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
YIPF4Q9BSR8 AC008406.3-201ENST00000620001 1374 ntBASIC20.88■□□□□ 0.93
YIPF4Q9BSR8 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
YIPF4Q9BSR8 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.88■□□□□ 0.93
YIPF4Q9BSR8 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
YIPF4Q9BSR8 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.88■□□□□ 0.93
YIPF4Q9BSR8 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.88■□□□□ 0.93
YIPF4Q9BSR8 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
YIPF4Q9BSR8 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
YIPF4Q9BSR8 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.88■□□□□ 0.93
YIPF4Q9BSR8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
YIPF4Q9BSR8 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
YIPF4Q9BSR8 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
YIPF4Q9BSR8 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
YIPF4Q9BSR8 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
YIPF4Q9BSR8 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
YIPF4Q9BSR8 AC144652.1-201ENST00000609974 1624 ntBASIC20.86■□□□□ 0.93
YIPF4Q9BSR8 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
YIPF4Q9BSR8 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
YIPF4Q9BSR8 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
YIPF4Q9BSR8 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
YIPF4Q9BSR8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
YIPF4Q9BSR8 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.86■□□□□ 0.93
YIPF4Q9BSR8 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
YIPF4Q9BSR8 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
YIPF4Q9BSR8 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
YIPF4Q9BSR8 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
YIPF4Q9BSR8 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
YIPF4Q9BSR8 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
YIPF4Q9BSR8 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
YIPF4Q9BSR8 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
YIPF4Q9BSR8 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.85■□□□□ 0.93
YIPF4Q9BSR8 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.85■□□□□ 0.93
YIPF4Q9BSR8 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
YIPF4Q9BSR8 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
YIPF4Q9BSR8 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.85■□□□□ 0.93
YIPF4Q9BSR8 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
YIPF4Q9BSR8 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.85■□□□□ 0.93
YIPF4Q9BSR8 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms