Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.63■□□□□ 0.89
Cdk5rap3Q99LM2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
Cdk5rap3Q99LM2 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdk5rap3Q99LM2 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdk5rap3Q99LM2 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdk5rap3Q99LM2 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cdk5rap3Q99LM2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Cdk5rap3Q99LM2 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.62■□□□□ 0.89
Cdk5rap3Q99LM2 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdk5rap3Q99LM2 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdk5rap3Q99LM2 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Cdk5rap3Q99LM2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdk5rap3Q99LM2 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.62■□□□□ 0.89
Cdk5rap3Q99LM2 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cdk5rap3Q99LM2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Cdk5rap3Q99LM2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cdk5rap3Q99LM2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdk5rap3Q99LM2 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdk5rap3Q99LM2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Cdk5rap3Q99LM2 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cdk5rap3Q99LM2 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdk5rap3Q99LM2 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Cdk5rap3Q99LM2 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cdk5rap3Q99LM2 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Cdk5rap3Q99LM2 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdk5rap3Q99LM2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdk5rap3Q99LM2 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.6■□□□□ 0.89
Cdk5rap3Q99LM2 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdk5rap3Q99LM2 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cdk5rap3Q99LM2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cdk5rap3Q99LM2 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Cdk5rap3Q99LM2 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Cdk5rap3Q99LM2 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdk5rap3Q99LM2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdk5rap3Q99LM2 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdk5rap3Q99LM2 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cdk5rap3Q99LM2 Iqck-206ENSMUST00000208658 2891 ntBASIC20.59■□□□□ 0.89
Cdk5rap3Q99LM2 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.58■□□□□ 0.89
Cdk5rap3Q99LM2 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
Cdk5rap3Q99LM2 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdk5rap3Q99LM2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdk5rap3Q99LM2 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.58■□□□□ 0.89
Cdk5rap3Q99LM2 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.58■□□□□ 0.89
Cdk5rap3Q99LM2 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
Cdk5rap3Q99LM2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdk5rap3Q99LM2 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdk5rap3Q99LM2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdk5rap3Q99LM2 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdk5rap3Q99LM2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.57■□□□□ 0.88
Cdk5rap3Q99LM2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdk5rap3Q99LM2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.57■□□□□ 0.88
Cdk5rap3Q99LM2 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdk5rap3Q99LM2 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdk5rap3Q99LM2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdk5rap3Q99LM2 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cdk5rap3Q99LM2 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdk5rap3Q99LM2 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cdk5rap3Q99LM2 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdk5rap3Q99LM2 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdk5rap3Q99LM2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdk5rap3Q99LM2 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cdk5rap3Q99LM2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdk5rap3Q99LM2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdk5rap3Q99LM2 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdk5rap3Q99LM2 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cdk5rap3Q99LM2 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdk5rap3Q99LM2 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdk5rap3Q99LM2 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdk5rap3Q99LM2 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Cdk5rap3Q99LM2 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.55■□□□□ 0.88
Cdk5rap3Q99LM2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdk5rap3Q99LM2 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdk5rap3Q99LM2 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cdk5rap3Q99LM2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Cdk5rap3Q99LM2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cdk5rap3Q99LM2 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.54■□□□□ 0.88
Cdk5rap3Q99LM2 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdk5rap3Q99LM2 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdk5rap3Q99LM2 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
Cdk5rap3Q99LM2 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Cdk5rap3Q99LM2 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdk5rap3Q99LM2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cdk5rap3Q99LM2 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.53■□□□□ 0.88
Cdk5rap3Q99LM2 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cdk5rap3Q99LM2 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdk5rap3Q99LM2 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cdk5rap3Q99LM2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.53■□□□□ 0.88
Cdk5rap3Q99LM2 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdk5rap3Q99LM2 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.53■□□□□ 0.88
Cdk5rap3Q99LM2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.53■□□□□ 0.88
Cdk5rap3Q99LM2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.53■□□□□ 0.88
Cdk5rap3Q99LM2 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdk5rap3Q99LM2 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdk5rap3Q99LM2 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cdk5rap3Q99LM2 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cdk5rap3Q99LM2 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cdk5rap3Q99LM2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.53■□□□□ 0.88
Cdk5rap3Q99LM2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdk5rap3Q99LM2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cdk5rap3Q99LM2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms