Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Col20a1Q923P0 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Col20a1Q923P0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Col20a1Q923P0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC23.65■■□□□ 1.38
Col20a1Q923P0 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC23.65■■□□□ 1.38
Col20a1Q923P0 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
Col20a1Q923P0 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Col20a1Q923P0 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Col20a1Q923P0 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Col20a1Q923P0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Col20a1Q923P0 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Col20a1Q923P0 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Col20a1Q923P0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Col20a1Q923P0 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC23.64■■□□□ 1.38
Col20a1Q923P0 Gm10129-202ENSMUST00000193100 1316 ntBASIC23.64■■□□□ 1.37
Col20a1Q923P0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC23.64■■□□□ 1.37
Col20a1Q923P0 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC23.64■■□□□ 1.37
Col20a1Q923P0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col20a1Q923P0 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Col20a1Q923P0 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col20a1Q923P0 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC23.63■■□□□ 1.37
Col20a1Q923P0 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC23.63■■□□□ 1.37
Col20a1Q923P0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Col20a1Q923P0 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col20a1Q923P0 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col20a1Q923P0 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
Col20a1Q923P0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Col20a1Q923P0 AC099934.2-201ENSMUST00000196389 70 ntBASIC23.61■■□□□ 1.37
Col20a1Q923P0 AC156953.1-201ENSMUST00000196953 70 ntBASIC23.61■■□□□ 1.37
Col20a1Q923P0 AC157822.2-201ENSMUST00000200291 70 ntBASIC23.61■■□□□ 1.37
Col20a1Q923P0 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
Col20a1Q923P0 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Col20a1Q923P0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Col20a1Q923P0 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
Col20a1Q923P0 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Col20a1Q923P0 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC23.6■■□□□ 1.37
Col20a1Q923P0 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Col20a1Q923P0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Col20a1Q923P0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Col20a1Q923P0 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Col20a1Q923P0 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Col20a1Q923P0 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Col20a1Q923P0 Gm38160-201ENSMUST00000193090 2499 ntBASIC23.59■■□□□ 1.37
Col20a1Q923P0 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Col20a1Q923P0 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Col20a1Q923P0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Col20a1Q923P0 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Col20a1Q923P0 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC23.59■■□□□ 1.37
Col20a1Q923P0 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
Col20a1Q923P0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
Col20a1Q923P0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Col20a1Q923P0 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC23.58■■□□□ 1.36
Col20a1Q923P0 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.36
Col20a1Q923P0 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Col20a1Q923P0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
Col20a1Q923P0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Col20a1Q923P0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Col20a1Q923P0 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Col20a1Q923P0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Col20a1Q923P0 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Col20a1Q923P0 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Col20a1Q923P0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
Col20a1Q923P0 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC23.57■■□□□ 1.36
Col20a1Q923P0 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Col20a1Q923P0 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC23.57■■□□□ 1.36
Col20a1Q923P0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Col20a1Q923P0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC23.56■■□□□ 1.36
Col20a1Q923P0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Col20a1Q923P0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Col20a1Q923P0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Col20a1Q923P0 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Col20a1Q923P0 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Col20a1Q923P0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Col20a1Q923P0 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Col20a1Q923P0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
Col20a1Q923P0 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Col20a1Q923P0 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Col20a1Q923P0 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Col20a1Q923P0 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Col20a1Q923P0 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Col20a1Q923P0 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Col20a1Q923P0 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Col20a1Q923P0 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Col20a1Q923P0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Col20a1Q923P0 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC23.55■■□□□ 1.36
Col20a1Q923P0 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Col20a1Q923P0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Col20a1Q923P0 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Col20a1Q923P0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Col20a1Q923P0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Col20a1Q923P0 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Col20a1Q923P0 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Col20a1Q923P0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Col20a1Q923P0 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Col20a1Q923P0 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Col20a1Q923P0 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Col20a1Q923P0 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Col20a1Q923P0 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Col20a1Q923P0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Col20a1Q923P0 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms