Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdhb2Q91Y00 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdhb2Q91Y00 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.14■□□□□ 0.98
Pcdhb2Q91Y00 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb2Q91Y00 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Pcdhb2Q91Y00 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb2Q91Y00 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb2Q91Y00 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Pcdhb2Q91Y00 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb2Q91Y00 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.13■□□□□ 0.97
Pcdhb2Q91Y00 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb2Q91Y00 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb2Q91Y00 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb2Q91Y00 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb2Q91Y00 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb2Q91Y00 Gm8493-201ENSMUST00000196881 489 ntBASIC21.13■□□□□ 0.97
Pcdhb2Q91Y00 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb2Q91Y00 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb2Q91Y00 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb2Q91Y00 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb2Q91Y00 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb2Q91Y00 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.12■□□□□ 0.97
Pcdhb2Q91Y00 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb2Q91Y00 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb2Q91Y00 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb2Q91Y00 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.12■□□□□ 0.97
Pcdhb2Q91Y00 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb2Q91Y00 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Pcdhb2Q91Y00 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb2Q91Y00 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Pcdhb2Q91Y00 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb2Q91Y00 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb2Q91Y00 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.11■□□□□ 0.97
Pcdhb2Q91Y00 Gm6139-201ENSMUST00000079261 882 ntBASIC21.11■□□□□ 0.97
Pcdhb2Q91Y00 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb2Q91Y00 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb2Q91Y00 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
Pcdhb2Q91Y00 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb2Q91Y00 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb2Q91Y00 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.1■□□□□ 0.97
Pcdhb2Q91Y00 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Pcdhb2Q91Y00 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb2Q91Y00 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhb2Q91Y00 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
Pcdhb2Q91Y00 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.09■□□□□ 0.97
Pcdhb2Q91Y00 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Pcdhb2Q91Y00 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Pcdhb2Q91Y00 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.09■□□□□ 0.97
Pcdhb2Q91Y00 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.09■□□□□ 0.97
Pcdhb2Q91Y00 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhb2Q91Y00 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Pcdhb2Q91Y00 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb2Q91Y00 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb2Q91Y00 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb2Q91Y00 Spcs1-204ENSMUST00000226782 949 ntBASIC21.08■□□□□ 0.97
Pcdhb2Q91Y00 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb2Q91Y00 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb2Q91Y00 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb2Q91Y00 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.96
Pcdhb2Q91Y00 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhb2Q91Y00 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhb2Q91Y00 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.08■□□□□ 0.96
Pcdhb2Q91Y00 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhb2Q91Y00 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhb2Q91Y00 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.07■□□□□ 0.96
Pcdhb2Q91Y00 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
Pcdhb2Q91Y00 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhb2Q91Y00 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.07■□□□□ 0.96
Pcdhb2Q91Y00 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Pcdhb2Q91Y00 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhb2Q91Y00 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
Pcdhb2Q91Y00 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.06■□□□□ 0.96
Pcdhb2Q91Y00 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.06■□□□□ 0.96
Pcdhb2Q91Y00 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhb2Q91Y00 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhb2Q91Y00 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhb2Q91Y00 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb2Q91Y00 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb2Q91Y00 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb2Q91Y00 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb2Q91Y00 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb2Q91Y00 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb2Q91Y00 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb2Q91Y00 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb2Q91Y00 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb2Q91Y00 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb2Q91Y00 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb2Q91Y00 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb2Q91Y00 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.04■□□□□ 0.96
Pcdhb2Q91Y00 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb2Q91Y00 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb2Q91Y00 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb2Q91Y00 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Pcdhb2Q91Y00 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb2Q91Y00 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.04■□□□□ 0.96
Pcdhb2Q91Y00 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb2Q91Y00 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb2Q91Y00 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
Pcdhb2Q91Y00 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb2Q91Y00 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms