Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfc3Q8R323 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rfc3Q8R323 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.3■□□□□ 0.52
Rfc3Q8R323 Gm8493-201ENSMUST00000196881 489 ntBASIC18.3■□□□□ 0.52
Rfc3Q8R323 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfc3Q8R323 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Rfc3Q8R323 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.29■□□□□ 0.52
Rfc3Q8R323 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Rfc3Q8R323 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfc3Q8R323 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.29■□□□□ 0.52
Rfc3Q8R323 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfc3Q8R323 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.29■□□□□ 0.52
Rfc3Q8R323 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Rfc3Q8R323 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfc3Q8R323 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfc3Q8R323 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rfc3Q8R323 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Rfc3Q8R323 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfc3Q8R323 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfc3Q8R323 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.28■□□□□ 0.52
Rfc3Q8R323 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfc3Q8R323 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
Rfc3Q8R323 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfc3Q8R323 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.28■□□□□ 0.52
Rfc3Q8R323 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Rfc3Q8R323 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.28■□□□□ 0.52
Rfc3Q8R323 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rfc3Q8R323 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rfc3Q8R323 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfc3Q8R323 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.27■□□□□ 0.52
Rfc3Q8R323 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfc3Q8R323 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfc3Q8R323 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rfc3Q8R323 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfc3Q8R323 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.27■□□□□ 0.52
Rfc3Q8R323 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Rfc3Q8R323 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.27■□□□□ 0.52
Rfc3Q8R323 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfc3Q8R323 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Rfc3Q8R323 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfc3Q8R323 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.27■□□□□ 0.51
Rfc3Q8R323 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rfc3Q8R323 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
Rfc3Q8R323 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rfc3Q8R323 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfc3Q8R323 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.26■□□□□ 0.51
Rfc3Q8R323 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Rfc3Q8R323 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfc3Q8R323 Gm12251-201ENSMUST00000117893 792 ntBASIC18.26■□□□□ 0.51
Rfc3Q8R323 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfc3Q8R323 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfc3Q8R323 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Rfc3Q8R323 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfc3Q8R323 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rfc3Q8R323 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfc3Q8R323 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfc3Q8R323 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Rfc3Q8R323 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Rfc3Q8R323 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rfc3Q8R323 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rfc3Q8R323 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfc3Q8R323 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfc3Q8R323 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfc3Q8R323 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfc3Q8R323 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfc3Q8R323 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rfc3Q8R323 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
Rfc3Q8R323 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rfc3Q8R323 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.24■□□□□ 0.51
Rfc3Q8R323 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Rfc3Q8R323 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfc3Q8R323 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfc3Q8R323 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
Rfc3Q8R323 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Rfc3Q8R323 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.24■□□□□ 0.51
Rfc3Q8R323 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfc3Q8R323 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfc3Q8R323 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Rfc3Q8R323 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfc3Q8R323 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfc3Q8R323 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rfc3Q8R323 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rfc3Q8R323 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfc3Q8R323 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfc3Q8R323 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfc3Q8R323 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rfc3Q8R323 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.22■□□□□ 0.51
Rfc3Q8R323 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rfc3Q8R323 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
Rfc3Q8R323 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfc3Q8R323 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfc3Q8R323 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfc3Q8R323 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rfc3Q8R323 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfc3Q8R323 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfc3Q8R323 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfc3Q8R323 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rfc3Q8R323 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Rfc3Q8R323 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rfc3Q8R323 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms