Protein–RNA interactions for Protein: Q8K0V4

Cnot3, CCR4-NOT transcription complex subunit 3, mousemouse

Known RBP Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot3Q8K0V4 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cnot3Q8K0V4 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cnot3Q8K0V4 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Cnot3Q8K0V4 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cnot3Q8K0V4 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cnot3Q8K0V4 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Cnot3Q8K0V4 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cnot3Q8K0V4 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Cnot3Q8K0V4 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cnot3Q8K0V4 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cnot3Q8K0V4 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cnot3Q8K0V4 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Cnot3Q8K0V4 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.67■□□□□ 0.58
Cnot3Q8K0V4 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cnot3Q8K0V4 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.67■□□□□ 0.58
Cnot3Q8K0V4 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.67■□□□□ 0.58
Cnot3Q8K0V4 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cnot3Q8K0V4 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cnot3Q8K0V4 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Cnot3Q8K0V4 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cnot3Q8K0V4 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cnot3Q8K0V4 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Cnot3Q8K0V4 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.66■□□□□ 0.58
Cnot3Q8K0V4 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cnot3Q8K0V4 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.66■□□□□ 0.58
Cnot3Q8K0V4 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cnot3Q8K0V4 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cnot3Q8K0V4 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.66■□□□□ 0.58
Cnot3Q8K0V4 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cnot3Q8K0V4 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cnot3Q8K0V4 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cnot3Q8K0V4 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Cnot3Q8K0V4 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cnot3Q8K0V4 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.65■□□□□ 0.58
Cnot3Q8K0V4 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.65■□□□□ 0.58
Cnot3Q8K0V4 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cnot3Q8K0V4 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Cnot3Q8K0V4 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cnot3Q8K0V4 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Cnot3Q8K0V4 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Cnot3Q8K0V4 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.65■□□□□ 0.58
Cnot3Q8K0V4 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cnot3Q8K0V4 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cnot3Q8K0V4 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cnot3Q8K0V4 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cnot3Q8K0V4 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Cnot3Q8K0V4 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Cnot3Q8K0V4 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cnot3Q8K0V4 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cnot3Q8K0V4 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
Cnot3Q8K0V4 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cnot3Q8K0V4 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cnot3Q8K0V4 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.63■□□□□ 0.57
Cnot3Q8K0V4 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cnot3Q8K0V4 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Cnot3Q8K0V4 Gm10420-201ENSMUST00000121713 882 ntBASIC18.63■□□□□ 0.57
Cnot3Q8K0V4 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.63■□□□□ 0.57
Cnot3Q8K0V4 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.63■□□□□ 0.57
Cnot3Q8K0V4 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cnot3Q8K0V4 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cnot3Q8K0V4 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cnot3Q8K0V4 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cnot3Q8K0V4 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cnot3Q8K0V4 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Cnot3Q8K0V4 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cnot3Q8K0V4 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cnot3Q8K0V4 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cnot3Q8K0V4 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cnot3Q8K0V4 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cnot3Q8K0V4 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cnot3Q8K0V4 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cnot3Q8K0V4 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cnot3Q8K0V4 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.62■□□□□ 0.57
Cnot3Q8K0V4 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cnot3Q8K0V4 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cnot3Q8K0V4 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cnot3Q8K0V4 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cnot3Q8K0V4 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cnot3Q8K0V4 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Cnot3Q8K0V4 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Cnot3Q8K0V4 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.61■□□□□ 0.57
Cnot3Q8K0V4 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cnot3Q8K0V4 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cnot3Q8K0V4 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cnot3Q8K0V4 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.61■□□□□ 0.57
Cnot3Q8K0V4 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cnot3Q8K0V4 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cnot3Q8K0V4 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cnot3Q8K0V4 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cnot3Q8K0V4 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Cnot3Q8K0V4 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cnot3Q8K0V4 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cnot3Q8K0V4 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cnot3Q8K0V4 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cnot3Q8K0V4 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.6■□□□□ 0.57
Cnot3Q8K0V4 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cnot3Q8K0V4 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.6■□□□□ 0.57
Cnot3Q8K0V4 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cnot3Q8K0V4 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.6■□□□□ 0.57
Cnot3Q8K0V4 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms