Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TMEFF1Q8IYR6 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
TMEFF1Q8IYR6 ID1-201ENST00000376105 1233 ntBASIC22.32■■□□□ 1.16
TMEFF1Q8IYR6 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC22.32■■□□□ 1.16
TMEFF1Q8IYR6 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC22.32■■□□□ 1.16
TMEFF1Q8IYR6 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.32■■□□□ 1.16
TMEFF1Q8IYR6 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
TMEFF1Q8IYR6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC22.32■■□□□ 1.16
TMEFF1Q8IYR6 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.32■■□□□ 1.16
TMEFF1Q8IYR6 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.32■■□□□ 1.16
TMEFF1Q8IYR6 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.32■■□□□ 1.16
TMEFF1Q8IYR6 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TMEFF1Q8IYR6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TMEFF1Q8IYR6 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
TMEFF1Q8IYR6 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.31■■□□□ 1.16
TMEFF1Q8IYR6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC22.31■■□□□ 1.16
TMEFF1Q8IYR6 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TMEFF1Q8IYR6 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TMEFF1Q8IYR6 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
TMEFF1Q8IYR6 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
TMEFF1Q8IYR6 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TMEFF1Q8IYR6 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TMEFF1Q8IYR6 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TMEFF1Q8IYR6 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
TMEFF1Q8IYR6 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TMEFF1Q8IYR6 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
TMEFF1Q8IYR6 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TMEFF1Q8IYR6 AC135731.1-201ENST00000569415 2548 ntBASIC22.29■■□□□ 1.16
TMEFF1Q8IYR6 LINC02228-203ENST00000641970 1355 ntBASIC22.29■■□□□ 1.16
TMEFF1Q8IYR6 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TMEFF1Q8IYR6 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TMEFF1Q8IYR6 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.29■■□□□ 1.16
TMEFF1Q8IYR6 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
TMEFF1Q8IYR6 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.29■■□□□ 1.16
TMEFF1Q8IYR6 TERF1P2-201ENST00000583350 1212 ntBASIC22.29■■□□□ 1.16
TMEFF1Q8IYR6 AL499627.2-201ENST00000606283 725 ntBASIC22.29■■□□□ 1.16
TMEFF1Q8IYR6 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
TMEFF1Q8IYR6 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
TMEFF1Q8IYR6 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
TMEFF1Q8IYR6 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TMEFF1Q8IYR6 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.28■■□□□ 1.16
TMEFF1Q8IYR6 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
TMEFF1Q8IYR6 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.28■■□□□ 1.16
TMEFF1Q8IYR6 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TMEFF1Q8IYR6 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TMEFF1Q8IYR6 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TMEFF1Q8IYR6 TMEM202-AS1-202ENST00000565181 2325 ntBASIC22.28■■□□□ 1.16
TMEFF1Q8IYR6 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TMEFF1Q8IYR6 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
TMEFF1Q8IYR6 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TMEFF1Q8IYR6 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
TMEFF1Q8IYR6 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TMEFF1Q8IYR6 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
TMEFF1Q8IYR6 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TMEFF1Q8IYR6 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TMEFF1Q8IYR6 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TMEFF1Q8IYR6 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TMEFF1Q8IYR6 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.27■■□□□ 1.16
TMEFF1Q8IYR6 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TMEFF1Q8IYR6 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TMEFF1Q8IYR6 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.27■■□□□ 1.15
TMEFF1Q8IYR6 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
TMEFF1Q8IYR6 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.27■■□□□ 1.15
TMEFF1Q8IYR6 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
TMEFF1Q8IYR6 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TMEFF1Q8IYR6 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
TMEFF1Q8IYR6 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.26■■□□□ 1.15
TMEFF1Q8IYR6 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
TMEFF1Q8IYR6 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.26■■□□□ 1.15
TMEFF1Q8IYR6 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TMEFF1Q8IYR6 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.26■■□□□ 1.15
TMEFF1Q8IYR6 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.26■■□□□ 1.15
TMEFF1Q8IYR6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.26■■□□□ 1.15
TMEFF1Q8IYR6 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TMEFF1Q8IYR6 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TMEFF1Q8IYR6 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.25■■□□□ 1.15
TMEFF1Q8IYR6 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TMEFF1Q8IYR6 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TMEFF1Q8IYR6 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TMEFF1Q8IYR6 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TMEFF1Q8IYR6 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TMEFF1Q8IYR6 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
TMEFF1Q8IYR6 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
TMEFF1Q8IYR6 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TMEFF1Q8IYR6 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TMEFF1Q8IYR6 AC022211.4-201ENST00000625094 2161 ntBASIC22.25■■□□□ 1.15
TMEFF1Q8IYR6 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.25■■□□□ 1.15
TMEFF1Q8IYR6 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TMEFF1Q8IYR6 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.24■■□□□ 1.15
TMEFF1Q8IYR6 OR2I1P-207ENST00000453522 948 ntBASIC22.24■■□□□ 1.15
TMEFF1Q8IYR6 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.24■■□□□ 1.15
TMEFF1Q8IYR6 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.24■■□□□ 1.15
TMEFF1Q8IYR6 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC22.24■■□□□ 1.15
TMEFF1Q8IYR6 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.24■■□□□ 1.15
TMEFF1Q8IYR6 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TMEFF1Q8IYR6 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
TMEFF1Q8IYR6 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TMEFF1Q8IYR6 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TMEFF1Q8IYR6 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC22.23■■□□□ 1.15
TMEFF1Q8IYR6 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms