Protein–RNA interactions for Protein: Q8BLA8

Trpa1, Transient receptor potential cation channel subfamily A member 1, mousemouse

Predictions only

Length 1,125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpa1Q8BLA8 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trpa1Q8BLA8 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.85■□□□□ 0.93
Trpa1Q8BLA8 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Trpa1Q8BLA8 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trpa1Q8BLA8 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trpa1Q8BLA8 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trpa1Q8BLA8 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trpa1Q8BLA8 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trpa1Q8BLA8 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Trpa1Q8BLA8 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Trpa1Q8BLA8 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trpa1Q8BLA8 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trpa1Q8BLA8 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.83■□□□□ 0.93
Trpa1Q8BLA8 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trpa1Q8BLA8 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trpa1Q8BLA8 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Trpa1Q8BLA8 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.83■□□□□ 0.93
Trpa1Q8BLA8 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trpa1Q8BLA8 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.83■□□□□ 0.93
Trpa1Q8BLA8 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Trpa1Q8BLA8 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trpa1Q8BLA8 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trpa1Q8BLA8 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trpa1Q8BLA8 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trpa1Q8BLA8 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trpa1Q8BLA8 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trpa1Q8BLA8 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trpa1Q8BLA8 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trpa1Q8BLA8 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trpa1Q8BLA8 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trpa1Q8BLA8 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trpa1Q8BLA8 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trpa1Q8BLA8 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Trpa1Q8BLA8 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trpa1Q8BLA8 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trpa1Q8BLA8 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trpa1Q8BLA8 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trpa1Q8BLA8 Gm27454-201ENSMUST00000185090 204 ntBASIC20.81■□□□□ 0.92
Trpa1Q8BLA8 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trpa1Q8BLA8 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trpa1Q8BLA8 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Trpa1Q8BLA8 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.81■□□□□ 0.92
Trpa1Q8BLA8 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.8■□□□□ 0.92
Trpa1Q8BLA8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trpa1Q8BLA8 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trpa1Q8BLA8 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trpa1Q8BLA8 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.8■□□□□ 0.92
Trpa1Q8BLA8 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trpa1Q8BLA8 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Trpa1Q8BLA8 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Trpa1Q8BLA8 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trpa1Q8BLA8 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trpa1Q8BLA8 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Trpa1Q8BLA8 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trpa1Q8BLA8 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trpa1Q8BLA8 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Trpa1Q8BLA8 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trpa1Q8BLA8 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trpa1Q8BLA8 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.79■□□□□ 0.92
Trpa1Q8BLA8 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.79■□□□□ 0.92
Trpa1Q8BLA8 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trpa1Q8BLA8 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trpa1Q8BLA8 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trpa1Q8BLA8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trpa1Q8BLA8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trpa1Q8BLA8 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Trpa1Q8BLA8 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trpa1Q8BLA8 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trpa1Q8BLA8 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.78■□□□□ 0.92
Trpa1Q8BLA8 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trpa1Q8BLA8 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trpa1Q8BLA8 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trpa1Q8BLA8 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trpa1Q8BLA8 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trpa1Q8BLA8 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
Trpa1Q8BLA8 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trpa1Q8BLA8 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
Trpa1Q8BLA8 Gm45417-201ENSMUST00000209533 758 ntBASIC20.77■□□□□ 0.92
Trpa1Q8BLA8 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trpa1Q8BLA8 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Trpa1Q8BLA8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Trpa1Q8BLA8 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trpa1Q8BLA8 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trpa1Q8BLA8 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.76■□□□□ 0.91
Trpa1Q8BLA8 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trpa1Q8BLA8 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Trpa1Q8BLA8 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trpa1Q8BLA8 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.76■□□□□ 0.91
Trpa1Q8BLA8 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Trpa1Q8BLA8 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.76■□□□□ 0.91
Trpa1Q8BLA8 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trpa1Q8BLA8 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trpa1Q8BLA8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trpa1Q8BLA8 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.75■□□□□ 0.91
Trpa1Q8BLA8 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trpa1Q8BLA8 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trpa1Q8BLA8 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trpa1Q8BLA8 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.75■□□□□ 0.91
Trpa1Q8BLA8 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Trpa1Q8BLA8 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms