Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC22.13■■□□□ 1.13
Usp6nlQ80XC3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Usp6nlQ80XC3 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Usp6nlQ80XC3 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
Usp6nlQ80XC3 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC22.13■■□□□ 1.13
Usp6nlQ80XC3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Usp6nlQ80XC3 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC22.12■■□□□ 1.13
Usp6nlQ80XC3 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Usp6nlQ80XC3 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Usp6nlQ80XC3 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Usp6nlQ80XC3 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Usp6nlQ80XC3 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC22.11■■□□□ 1.13
Usp6nlQ80XC3 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
Usp6nlQ80XC3 Gm9988-201ENSMUST00000069786 435 ntBASIC22.11■■□□□ 1.13
Usp6nlQ80XC3 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Usp6nlQ80XC3 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Usp6nlQ80XC3 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Usp6nlQ80XC3 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Usp6nlQ80XC3 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Usp6nlQ80XC3 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Usp6nlQ80XC3 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC22.1■■□□□ 1.13
Usp6nlQ80XC3 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC22.1■■□□□ 1.13
Usp6nlQ80XC3 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC22.1■■□□□ 1.13
Usp6nlQ80XC3 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC22.1■■□□□ 1.13
Usp6nlQ80XC3 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Usp6nlQ80XC3 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Usp6nlQ80XC3 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC22.1■■□□□ 1.13
Usp6nlQ80XC3 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
Usp6nlQ80XC3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Usp6nlQ80XC3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Usp6nlQ80XC3 Gm6277-202ENSMUST00000224036 2779 ntBASIC22.09■■□□□ 1.13
Usp6nlQ80XC3 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Usp6nlQ80XC3 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Usp6nlQ80XC3 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Usp6nlQ80XC3 Gm20634-201ENSMUST00000090779 2956 ntBASIC22.09■■□□□ 1.13
Usp6nlQ80XC3 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Usp6nlQ80XC3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Usp6nlQ80XC3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Usp6nlQ80XC3 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC22.08■■□□□ 1.13
Usp6nlQ80XC3 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC22.08■■□□□ 1.13
Usp6nlQ80XC3 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC22.08■■□□□ 1.13
Usp6nlQ80XC3 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC22.08■■□□□ 1.13
Usp6nlQ80XC3 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Usp6nlQ80XC3 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Usp6nlQ80XC3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Usp6nlQ80XC3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Usp6nlQ80XC3 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
Usp6nlQ80XC3 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Usp6nlQ80XC3 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.08■■□□□ 1.12
Usp6nlQ80XC3 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Usp6nlQ80XC3 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Usp6nlQ80XC3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Usp6nlQ80XC3 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Usp6nlQ80XC3 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC22.07■■□□□ 1.12
Usp6nlQ80XC3 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Usp6nlQ80XC3 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Usp6nlQ80XC3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Usp6nlQ80XC3 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Usp6nlQ80XC3 Gm13234-201ENSMUST00000120010 747 ntBASIC22.06■■□□□ 1.12
Usp6nlQ80XC3 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Usp6nlQ80XC3 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
Usp6nlQ80XC3 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC22.06■■□□□ 1.12
Usp6nlQ80XC3 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Usp6nlQ80XC3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Usp6nlQ80XC3 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.05■■□□□ 1.12
Usp6nlQ80XC3 Gm12933-201ENSMUST00000120203 872 ntBASIC22.05■■□□□ 1.12
Usp6nlQ80XC3 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC22.05■■□□□ 1.12
Usp6nlQ80XC3 AC122428.2-201ENSMUST00000216321 1832 ntBASIC22.05■■□□□ 1.12
Usp6nlQ80XC3 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC22.05■■□□□ 1.12
Usp6nlQ80XC3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC22.04■■□□□ 1.12
Usp6nlQ80XC3 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Usp6nlQ80XC3 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Usp6nlQ80XC3 Gm10602-201ENSMUST00000098239 609 ntBASIC22.04■■□□□ 1.12
Usp6nlQ80XC3 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
Usp6nlQ80XC3 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Usp6nlQ80XC3 Reep4-203ENSMUST00000226563 1444 ntBASIC22.04■■□□□ 1.12
Usp6nlQ80XC3 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC22.04■■□□□ 1.12
Usp6nlQ80XC3 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Usp6nlQ80XC3 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC22.03■■□□□ 1.12
Usp6nlQ80XC3 Gm27801-201ENSMUST00000184174 223 ntBASIC22.03■■□□□ 1.12
Usp6nlQ80XC3 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Usp6nlQ80XC3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Usp6nlQ80XC3 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Usp6nlQ80XC3 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Usp6nlQ80XC3 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Usp6nlQ80XC3 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Usp6nlQ80XC3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Usp6nlQ80XC3 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Usp6nlQ80XC3 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC22.02■■□□□ 1.12
Usp6nlQ80XC3 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Usp6nlQ80XC3 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Usp6nlQ80XC3 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.11
Usp6nlQ80XC3 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Usp6nlQ80XC3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Usp6nlQ80XC3 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Usp6nlQ80XC3 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Usp6nlQ80XC3 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC22.01■■□□□ 1.11
Usp6nlQ80XC3 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Usp6nlQ80XC3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.01■■□□□ 1.11
Usp6nlQ80XC3 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms