Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
Rpap1Q80TE0 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Rpap1Q80TE0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Rpap1Q80TE0 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Rpap1Q80TE0 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC31.41■■■□□ 2.62
Rpap1Q80TE0 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
Rpap1Q80TE0 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
Rpap1Q80TE0 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Rpap1Q80TE0 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC31.4■■■□□ 2.62
Rpap1Q80TE0 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Rpap1Q80TE0 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC31.4■■■□□ 2.62
Rpap1Q80TE0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Rpap1Q80TE0 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Rpap1Q80TE0 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Rpap1Q80TE0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC31.39■■■□□ 2.62
Rpap1Q80TE0 Gm42555-201ENSMUST00000199304 1039 ntBASIC31.39■■■□□ 2.62
Rpap1Q80TE0 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Rpap1Q80TE0 AC122428.2-201ENSMUST00000216321 1832 ntBASIC31.38■■■□□ 2.61
Rpap1Q80TE0 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Rpap1Q80TE0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Rpap1Q80TE0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Rpap1Q80TE0 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Rpap1Q80TE0 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Rpap1Q80TE0 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC31.37■■■□□ 2.61
Rpap1Q80TE0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC31.37■■■□□ 2.61
Rpap1Q80TE0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
Rpap1Q80TE0 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Rpap1Q80TE0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Rpap1Q80TE0 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC31.36■■■□□ 2.61
Rpap1Q80TE0 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
Rpap1Q80TE0 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Rpap1Q80TE0 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC31.36■■■□□ 2.61
Rpap1Q80TE0 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
Rpap1Q80TE0 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Rpap1Q80TE0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Rpap1Q80TE0 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC31.35■■■□□ 2.61
Rpap1Q80TE0 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC31.35■■■□□ 2.61
Rpap1Q80TE0 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Rpap1Q80TE0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Rpap1Q80TE0 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Rpap1Q80TE0 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Rpap1Q80TE0 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC31.34■■■□□ 2.61
Rpap1Q80TE0 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC31.34■■■□□ 2.61
Rpap1Q80TE0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC31.34■■■□□ 2.61
Rpap1Q80TE0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Rpap1Q80TE0 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Rpap1Q80TE0 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Rpap1Q80TE0 Mir5133-201ENSMUST00000174955 77 ntBASIC31.33■■■□□ 2.61
Rpap1Q80TE0 Gm4968-201ENSMUST00000071458 858 ntBASIC31.33■■■□□ 2.61
Rpap1Q80TE0 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC31.33■■■□□ 2.61
Rpap1Q80TE0 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Rpap1Q80TE0 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Rpap1Q80TE0 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Rpap1Q80TE0 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
Rpap1Q80TE0 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC31.32■■■□□ 2.61
Rpap1Q80TE0 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC31.32■■■□□ 2.61
Rpap1Q80TE0 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC31.32■■■□□ 2.61
Rpap1Q80TE0 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC31.32■■■□□ 2.61
Rpap1Q80TE0 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Rpap1Q80TE0 Gm10571-201ENSMUST00000097869 1638 ntBASIC31.32■■■□□ 2.6
Rpap1Q80TE0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Rpap1Q80TE0 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Rpap1Q80TE0 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Rpap1Q80TE0 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Rpap1Q80TE0 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Rpap1Q80TE0 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
Rpap1Q80TE0 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Rpap1Q80TE0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
Rpap1Q80TE0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Rpap1Q80TE0 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC31.29■■■□□ 2.6
Rpap1Q80TE0 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
Rpap1Q80TE0 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC31.28■■■□□ 2.6
Rpap1Q80TE0 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Rpap1Q80TE0 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC31.27■■■□□ 2.6
Rpap1Q80TE0 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Rpap1Q80TE0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Rpap1Q80TE0 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Rpap1Q80TE0 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
Rpap1Q80TE0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Rpap1Q80TE0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Rpap1Q80TE0 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Rpap1Q80TE0 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC31.26■■■□□ 2.6
Rpap1Q80TE0 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
Rpap1Q80TE0 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Rpap1Q80TE0 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC31.25■■■□□ 2.59
Rpap1Q80TE0 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Rpap1Q80TE0 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Rpap1Q80TE0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Rpap1Q80TE0 Gm12527-201ENSMUST00000117967 564 ntBASIC31.24■■■□□ 2.59
Rpap1Q80TE0 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC31.24■■■□□ 2.59
Rpap1Q80TE0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC31.23■■■□□ 2.59
Rpap1Q80TE0 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Rpap1Q80TE0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Rpap1Q80TE0 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
Rpap1Q80TE0 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Rpap1Q80TE0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC31.22■■■□□ 2.59
Rpap1Q80TE0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC31.22■■■□□ 2.59
Rpap1Q80TE0 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC31.21■■■□□ 2.59
Rpap1Q80TE0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
Rpap1Q80TE0 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms