Protein–RNA interactions for Protein: Q61116

Znf235, Zinc finger protein 235, mousemouse

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf235Q61116 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Znf235Q61116 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Znf235Q61116 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Znf235Q61116 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Znf235Q61116 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Znf235Q61116 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Znf235Q61116 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Znf235Q61116 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Znf235Q61116 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.97
Znf235Q61116 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Znf235Q61116 Gm10493-201ENSMUST00000097270 612 ntBASIC21.08■□□□□ 0.97
Znf235Q61116 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Znf235Q61116 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Znf235Q61116 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.08■□□□□ 0.96
Znf235Q61116 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.07■□□□□ 0.96
Znf235Q61116 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Znf235Q61116 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Znf235Q61116 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.07■□□□□ 0.96
Znf235Q61116 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Znf235Q61116 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Znf235Q61116 Gm11421-201ENSMUST00000122124 294 ntBASIC21.07■□□□□ 0.96
Znf235Q61116 Slc35b2-207ENSMUST00000226086 850 ntBASIC21.07■□□□□ 0.96
Znf235Q61116 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Znf235Q61116 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
Znf235Q61116 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Znf235Q61116 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Znf235Q61116 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Znf235Q61116 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Znf235Q61116 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Znf235Q61116 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Znf235Q61116 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Znf235Q61116 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Znf235Q61116 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Znf235Q61116 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Znf235Q61116 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.06■□□□□ 0.96
Znf235Q61116 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Znf235Q61116 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Znf235Q61116 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Znf235Q61116 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
Znf235Q61116 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
Znf235Q61116 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Znf235Q61116 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Znf235Q61116 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Znf235Q61116 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.05■□□□□ 0.96
Znf235Q61116 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Znf235Q61116 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Znf235Q61116 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Znf235Q61116 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Znf235Q61116 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Znf235Q61116 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.03■□□□□ 0.96
Znf235Q61116 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
Znf235Q61116 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Znf235Q61116 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Znf235Q61116 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.02■□□□□ 0.96
Znf235Q61116 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Znf235Q61116 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Znf235Q61116 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Znf235Q61116 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Znf235Q61116 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.02■□□□□ 0.96
Znf235Q61116 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Znf235Q61116 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Znf235Q61116 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Znf235Q61116 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Znf235Q61116 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Znf235Q61116 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.02■□□□□ 0.95
Znf235Q61116 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Znf235Q61116 Gm26571-201ENSMUST00000181399 666 ntBASIC21.01■□□□□ 0.95
Znf235Q61116 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.01■□□□□ 0.95
Znf235Q61116 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Znf235Q61116 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Znf235Q61116 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Znf235Q61116 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21■□□□□ 0.95
Znf235Q61116 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC21■□□□□ 0.95
Znf235Q61116 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Znf235Q61116 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Znf235Q61116 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Znf235Q61116 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Znf235Q61116 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Znf235Q61116 Gm10849-201ENSMUST00000100397 618 ntBASIC20.99■□□□□ 0.95
Znf235Q61116 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.99■□□□□ 0.95
Znf235Q61116 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.99■□□□□ 0.95
Znf235Q61116 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Znf235Q61116 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Znf235Q61116 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Znf235Q61116 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Znf235Q61116 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Znf235Q61116 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Znf235Q61116 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Znf235Q61116 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Znf235Q61116 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Znf235Q61116 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Znf235Q61116 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Znf235Q61116 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Znf235Q61116 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Znf235Q61116 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Znf235Q61116 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Znf235Q61116 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Znf235Q61116 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Znf235Q61116 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Znf235Q61116 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms