Protein–RNA interactions for Protein: P51670

Ccl9, C-C motif chemokine 9, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl9P51670 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.43■□□□□ 0.38
Ccl9P51670 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccl9P51670 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.43■□□□□ 0.38
Ccl9P51670 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Ccl9P51670 Gm5812-201ENSMUST00000061073 957 ntBASIC17.43■□□□□ 0.38
Ccl9P51670 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccl9P51670 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccl9P51670 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccl9P51670 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccl9P51670 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccl9P51670 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccl9P51670 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccl9P51670 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccl9P51670 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccl9P51670 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccl9P51670 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.42■□□□□ 0.38
Ccl9P51670 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccl9P51670 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccl9P51670 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.42■□□□□ 0.38
Ccl9P51670 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccl9P51670 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccl9P51670 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccl9P51670 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccl9P51670 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccl9P51670 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccl9P51670 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ccl9P51670 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Ccl9P51670 Gm15546-201ENSMUST00000122095 826 ntBASIC17.41■□□□□ 0.38
Ccl9P51670 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.41■□□□□ 0.38
Ccl9P51670 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.41■□□□□ 0.38
Ccl9P51670 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ccl9P51670 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ccl9P51670 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccl9P51670 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ccl9P51670 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccl9P51670 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.4■□□□□ 0.38
Ccl9P51670 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Ccl9P51670 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccl9P51670 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Ccl9P51670 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccl9P51670 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccl9P51670 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccl9P51670 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccl9P51670 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Ccl9P51670 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccl9P51670 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ccl9P51670 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ccl9P51670 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccl9P51670 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccl9P51670 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.39■□□□□ 0.37
Ccl9P51670 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccl9P51670 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccl9P51670 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Ccl9P51670 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.39■□□□□ 0.37
Ccl9P51670 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccl9P51670 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Ccl9P51670 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccl9P51670 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccl9P51670 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccl9P51670 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.38■□□□□ 0.37
Ccl9P51670 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccl9P51670 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Ccl9P51670 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccl9P51670 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Ccl9P51670 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.38■□□□□ 0.37
Ccl9P51670 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccl9P51670 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccl9P51670 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccl9P51670 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccl9P51670 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.38■□□□□ 0.37
Ccl9P51670 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccl9P51670 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccl9P51670 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccl9P51670 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccl9P51670 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccl9P51670 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccl9P51670 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
Ccl9P51670 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccl9P51670 Etf1-202ENSMUST00000180351 108 ntBASIC17.37■□□□□ 0.37
Ccl9P51670 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.37■□□□□ 0.37
Ccl9P51670 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccl9P51670 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccl9P51670 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccl9P51670 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccl9P51670 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccl9P51670 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Ccl9P51670 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccl9P51670 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Ccl9P51670 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccl9P51670 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccl9P51670 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccl9P51670 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccl9P51670 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccl9P51670 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccl9P51670 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccl9P51670 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccl9P51670 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ccl9P51670 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccl9P51670 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccl9P51670 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms