Protein–RNA interactions for Protein: P0CX61

TY2A-F, Transposon Ty2-F Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-FP0CX61 SUL2YLR092W 2682 nt4.64□□□□□ -1.67
TY2A-FP0CX61 YDL186WYDL186W 834 nt4.64□□□□□ -1.67
TY2A-FP0CX61 YDR124WYDR124W 975 nt4.64□□□□□ -1.67
TY2A-FP0CX61 YDR417CYDR417C 372 nt4.64□□□□□ -1.67
TY2A-FP0CX61 RPL28YGL103W 450 nt4.64□□□□□ -1.67
TY2A-FP0CX61 tR(UCU)Q1tR(UCU)Q1 73 nt4.64□□□□□ -1.67
TY2A-FP0CX61 PAN5YHR063C 1140 nt4.64□□□□□ -1.67
TY2A-FP0CX61 DBP8YHR169W 1296 nt4.64□□□□□ -1.67
TY2A-FP0CX61 HYM1YKL189W 1200 nt4.64□□□□□ -1.67
TY2A-FP0CX61 snR10snR10 245 nt4.64□□□□□ -1.67
TY2A-FP0CX61 BUB3YOR026W 1026 nt4.64□□□□□ -1.67
TY2A-FP0CX61 PNT1YOR266W 1272 nt4.64□□□□□ -1.67
TY2A-FP0CX61 ATG29YPL166W 642 nt4.64□□□□□ -1.67
TY2A-FP0CX61 SUT2YPR009W 807 nt4.64□□□□□ -1.67
TY2A-FP0CX61 TRE1YPL176C 2352 nt4.64□□□□□ -1.67
TY2A-FP0CX61 TYW1YPL207W 2433 nt4.64□□□□□ -1.67
TY2A-FP0CX61 SSA2YLL024C 1920 nt4.64□□□□□ -1.67
TY2A-FP0CX61 BUD14YAR014C 2130 nt4.63□□□□□ -1.67
TY2A-FP0CX61 MCX1YBR227C 1563 nt4.63□□□□□ -1.67
TY2A-FP0CX61 YCR050CYCR050C 309 nt4.63□□□□□ -1.67
TY2A-FP0CX61 BUD26YDR241W 288 nt4.63□□□□□ -1.67
TY2A-FP0CX61 ACT1YFL039C 1128 nt4.63□□□□□ -1.67
TY2A-FP0CX61 NPY1YGL067W 1155 nt4.63□□□□□ -1.67
TY2A-FP0CX61 GCD7YLR291C 1146 nt4.63□□□□□ -1.67
TY2A-FP0CX61 ENT1YDL161W 1365 nt4.63□□□□□ -1.67
TY2A-FP0CX61 SMF1YOL122C 1728 nt4.63□□□□□ -1.67
TY2A-FP0CX61 EXO1YOR033C 2109 nt4.63□□□□□ -1.67
TY2A-FP0CX61 TFA1YKL028W 1449 nt4.63□□□□□ -1.67
TY2A-FP0CX61 GCN20YFR009W 2259 nt4.62□□□□□ -1.67
TY2A-FP0CX61 GRS1YBR121C 2004 nt4.62□□□□□ -1.67
TY2A-FP0CX61 ARO2YGL148W 1131 nt4.62□□□□□ -1.67
TY2A-FP0CX61 tR(ACG)JtR(ACG)J 73 nt4.62□□□□□ -1.67
TY2A-FP0CX61 CYC1YJR048W 330 nt4.62□□□□□ -1.67
TY2A-FP0CX61 YML057C-AYML057C-A 390 nt4.62□□□□□ -1.67
TY2A-FP0CX61 ATG16YMR159C 453 nt4.62□□□□□ -1.67
TY2A-FP0CX61 MDG1YNL173C 1101 nt4.62□□□□□ -1.67
TY2A-FP0CX61 HRR25YPL204W 1485 nt4.62□□□□□ -1.67
TY2A-FP0CX61 DRN1YGR093W 1524 nt4.62□□□□□ -1.67
TY2A-FP0CX61 MIH1YMR036C 1665 nt4.61□□□□□ -1.67
TY2A-FP0CX61 RKM3YBR030W 1659 nt4.61□□□□□ -1.67
TY2A-FP0CX61 TRM1YDR120C 1713 nt4.61□□□□□ -1.67
TY2A-FP0CX61 MRPL32YCR003W 552 nt4.61□□□□□ -1.67
TY2A-FP0CX61 RRP8YDR083W 1179 nt4.61□□□□□ -1.67
TY2A-FP0CX61 RNH202YDR279W 1053 nt4.61□□□□□ -1.67
TY2A-FP0CX61 NOP16YER002W 696 nt4.61□□□□□ -1.67
TY2A-FP0CX61 YLR042CYLR042C 486 nt4.61□□□□□ -1.67
TY2A-FP0CX61 YNL162W-AYNL162W-A 219 nt4.61□□□□□ -1.67
TY2A-FP0CX61 YNL174WYNL174W 573 nt4.61□□□□□ -1.67
TY2A-FP0CX61 PEX34YCL056C 435 nt4.61□□□□□ -1.67
TY2A-FP0CX61 COT1YOR316C 1320 nt4.61□□□□□ -1.67
TY2A-FP0CX61 PUF2YPR042C 3228 nt4.61□□□□□ -1.67
TY2A-FP0CX61 YMR102CYMR102C 2505 nt4.61□□□□□ -1.67
TY2A-FP0CX61 PWP1YLR196W 1731 nt4.6□□□□□ -1.67
TY2A-FP0CX61 SKM1YOL113W 1968 nt4.6□□□□□ -1.67
TY2A-FP0CX61 NTH2YBR001C 2343 nt4.6□□□□□ -1.67
TY2A-FP0CX61 ATH1YPR026W 3636 nt4.6□□□□□ -1.67
TY2A-FP0CX61 RRP45YDR280W 918 nt4.6□□□□□ -1.67
TY2A-FP0CX61 FSH1YHR049W 732 nt4.6□□□□□ -1.67
TY2A-FP0CX61 ERV41YML067C 1059 nt4.6□□□□□ -1.67
TY2A-FP0CX61 SHE1YBL031W 1017 nt4.6□□□□□ -1.67
TY2A-FP0CX61 RPS10BYMR230W 318 nt4.6□□□□□ -1.67
TY2A-FP0CX61 MUM2YBR057C 1101 nt4.6□□□□□ -1.67
TY2A-FP0CX61 YPR142CYPR142C 564 nt4.6□□□□□ -1.67
TY2A-FP0CX61 SYP1YCR030C 2613 nt4.6□□□□□ -1.67
TY2A-FP0CX61 GAS4YOL132W 1416 nt4.6□□□□□ -1.67
TY2A-FP0CX61 POL31YJR006W 1464 nt4.6□□□□□ -1.67
TY2A-FP0CX61 YNL095CYNL095C 1929 nt4.6□□□□□ -1.67
TY2A-FP0CX61 ACS2YLR153C 2052 nt4.6□□□□□ -1.67
TY2A-FP0CX61 DNF2YDR093W 4839 nt4.59□□□□□ -1.67
TY2A-FP0CX61 SUR2YDR297W 1050 nt4.59□□□□□ -1.67
TY2A-FP0CX61 PAD1YDR538W 729 nt4.59□□□□□ -1.67
TY2A-FP0CX61 ARG3YJL088W 1017 nt4.59□□□□□ -1.67
TY2A-FP0CX61 MTD1YKR080W 963 nt4.59□□□□□ -1.67
TY2A-FP0CX61 SIC1YLR079W 855 nt4.59□□□□□ -1.67
TY2A-FP0CX61 YLR345WYLR345W 1530 nt4.59□□□□□ -1.67
TY2A-FP0CX61 IOC4YMR044W 1428 nt4.59□□□□□ -1.67
TY2A-FP0CX61 YNL019CYNL019C 855 nt4.59□□□□□ -1.67
TY2A-FP0CX61 YNL033WYNL033W 855 nt4.59□□□□□ -1.67
TY2A-FP0CX61 MDJ2YNL328C 441 nt4.59□□□□□ -1.67
TY2A-FP0CX61 YOR034C-AYOR034C-A 243 nt4.59□□□□□ -1.67
TY2A-FP0CX61 PDR10YOR328W 4695 nt4.59□□□□□ -1.67
TY2A-FP0CX61 YBR056W-AYBR056W-A 201 nt4.59□□□□□ -1.67
TY2A-FP0CX61 GRE1YPL223C 507 nt4.59□□□□□ -1.67
TY2A-FP0CX61 NHP6AYPR052C 282 nt4.59□□□□□ -1.67
TY2A-FP0CX61 ECM33YBR078W 1290 nt4.59□□□□□ -1.67
TY2A-FP0CX61 YCL001W-AYCL001W-A 462 nt4.59□□□□□ -1.67
TY2A-FP0CX61 CYK3YDL117W 2658 nt4.59□□□□□ -1.68
TY2A-FP0CX61 DOA1YKL213C 2148 nt4.58□□□□□ -1.68
TY2A-FP0CX61 TDA11YHR159W 1515 nt4.58□□□□□ -1.68
TY2A-FP0CX61 HUL4YJR036C 2679 nt4.58□□□□□ -1.68
TY2A-FP0CX61 YCR015CYCR015C 954 nt4.58□□□□□ -1.68
TY2A-FP0CX61 SHR3YDL212W 633 nt4.58□□□□□ -1.68
TY2A-FP0CX61 VPS29YHR012W 849 nt4.58□□□□□ -1.68
TY2A-FP0CX61 TEF4YKL081W 1239 nt4.58□□□□□ -1.68
TY2A-FP0CX61 ATG8YBL078C 354 nt4.58□□□□□ -1.68
TY2A-FP0CX61 PPG1YNR032W 1107 nt4.58□□□□□ -1.68
TY2A-FP0CX61 ARX1YDR101C 1782 nt4.58□□□□□ -1.68
TY2A-FP0CX61 NUP116YMR047C 3342 nt4.57□□□□□ -1.68
TY2A-FP0CX61 RCM1YNL022C 1473 nt4.57□□□□□ -1.68
TY2A-FP0CX61 NOP8YOL144W 1455 nt4.57□□□□□ -1.68
Retrieved 100 of 7,029 protein–RNA pairs in 47.7 ms